Gene Rru_A3545 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3545 
Symbol 
ID3837000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp4081538 
End bp4083178 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content65% 
IMG OID637827668 
ProductNa+/H+ antiporter 
Protein accessionYP_428626 
Protein GI83594874 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR00831] Na+/H+ antiporter, bacterial form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAACCA TCACGGTCGT TCTGTTCTTG CTGTTTTGCG TGGTGGTCAG CGATCTGCTG 
GCCCGCACGC TGCCCATACC GGTGCCCCGC CCGCTTTATC AGATCGCCCT GGGCGGGGTG
ATCGGCCTGT TCGCCGATCT GCGGGTCGTC CTTGAGCCCG ATATCTTCTT TCTGCTGTTC
CTGCCGCCCT TGCTGTTTCT TGACGGCTGG CATATCGCCC GCGAAGAGGT TTTCAAGGAC
CGCTTCGTCA TTTTGGAACT GGCCTTCGGT CTGGTTTTCC TCACCGTTCT GGGCGCCGGG
CTGTTCATCC ACTGGATGAT CCCGGCCATG CCGCTGGCCG TCGCCTTCGC CCTGGCCGCC
GTGGTGTCGC CCACCGATCC GATCGCGGTT TCGGCGATCG CCAAGCACGC GCCGATCCCC
AAGCGGATGA TGAACATCCT AGAAGGGGAA TCCCTGCTCA ACGACGCCTC GGGTCTGGTC
TGCCTGCGCT TCGCCGTGGC CGCGGCGCTG ACCGGCGGCT TTTCGTTGAC GGACGCGGCG
CTGGAGTTCC TGTGGGTGGC CCTGGCCGGC ATCGCCGTGG GAATTTCCCT GACCTGGGCG
GTGACGCGGT CGAAAAACAT GCTGGCGCGC CGCATCGGCG AAAGCAGCGC CACCCAGACC
CTGATCAGCC TGCTGATCCC CTTCGGGTCC TATCTGGTCG CCGAGCATCT CGACTGTTCG
GGCATTCTCG CCGCCGTCGC CGCCGGTGTG ACCATGAGCA TCGAGGAATC CTCGGGTCAG
GCCCAGGCGG CCACGCGCAT TCGCCGCAAT ACGGTGTGGG ATACCATCCA GTTCGCCGCC
AACGGGGTGA TTTTCGTCAT CCTCGGCGAA CAACTGCCGG CGATTCTCGA AAGCGCGGCC
GAAACCGTGC GGGTAACCGG CCATCACGAG CCGTGGTGGC TGGGGATCTA TGTGGTCGCG
ATCTGCCTGG GGCTGGCCGC CTTGCGGTTT TTGTGGGTCT GGGCGTCGCT GCAGGTGTCG
TTGCTCCGCA CCGGCCAGAA ACGCCCCCCC CGTCATTGGC GGCTGATCAC CGCCATGTCG
CTTTCAGGGG TGCGCGGCGC CATCACCCTG GCCGGCGTGC TGACCCTGCC ACTGACGATG
ACCGACGGCA CGGCCTTTCC CGCCCGCGAT CTGGCGATCT TCCTGGCCAT GGGGGTGATC
ATCGTGACCA TGGTCGTCGC CACCGTCTTT TTGCCGCTGC TGCTCAACGG CTTGGAGATG
TCCCAGGATT CGACGGCCGA CGATCAGGAG GCGGCCGCCC GCATCGCCGC CGCCGAAGTC
GCCATCGCCG AGATCGAGCG CGTTCAGCAC AGCATGGCCG AGGGAGCCAA GGACGCCGAT
CTGTTCGTGA CCGTCGGCGC CAGCCTGATG GATGTCTACC GCGAACGCGT CCGCAGCCGC
TCGCAAGAGG GCGAGGCCGC CGTGCTGGTG CGCCGCGTCG ACTGGATCGA ACGCGAAATG
CGGCTGGCCG CCCTGCGCGC CGAACGGAGC GAGATCTTTC GCCGGGTGCG CAAATACCAG
CTGGGCAGCG AAAGGGCGCG CAAGCTGATC CGCGAACTCG ACTTGCTGGA AACCCGCTAT
TCGGCCGAAC CCAAGGGTTG A
 
Protein sequence
METITVVLFL LFCVVVSDLL ARTLPIPVPR PLYQIALGGV IGLFADLRVV LEPDIFFLLF 
LPPLLFLDGW HIAREEVFKD RFVILELAFG LVFLTVLGAG LFIHWMIPAM PLAVAFALAA
VVSPTDPIAV SAIAKHAPIP KRMMNILEGE SLLNDASGLV CLRFAVAAAL TGGFSLTDAA
LEFLWVALAG IAVGISLTWA VTRSKNMLAR RIGESSATQT LISLLIPFGS YLVAEHLDCS
GILAAVAAGV TMSIEESSGQ AQAATRIRRN TVWDTIQFAA NGVIFVILGE QLPAILESAA
ETVRVTGHHE PWWLGIYVVA ICLGLAALRF LWVWASLQVS LLRTGQKRPP RHWRLITAMS
LSGVRGAITL AGVLTLPLTM TDGTAFPARD LAIFLAMGVI IVTMVVATVF LPLLLNGLEM
SQDSTADDQE AAARIAAAEV AIAEIERVQH SMAEGAKDAD LFVTVGASLM DVYRERVRSR
SQEGEAAVLV RRVDWIEREM RLAALRAERS EIFRRVRKYQ LGSERARKLI RELDLLETRY
SAEPKG