| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3389 |
|---|
| Symbol | |
|---|
| ID | 3836841 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 3905963 |
|---|
| End bp | 3907000 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637827510 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_428470 |
|---|
| Protein GI | 83594718 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2307] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGTC GCACCGCCGA CAATCTTTAC TGGATGACCC GTTACGTCGA ACGGGCCGAG
AACATGGCGC GCATCCTGGA TGTGTCCTAT CGGATGAGCC AGCTTCCGCG CAATGGCACG
GATGCGGCGG TGGAATGGGA ACCCGCCCTG ATCATCTCGG GCCAGAAACC CGATTTCGAG
ACGCGCTTCG AGGAGATCAC GGCGGGCAAT GTCATCGCCT ATATGGCGCT CGATCCCGAA
AACCCGTCGA GCATCGTCTC CACCCTGCAC GCCGCGCGCG AAAACGCCCG GGCCGAGCGC
TTCGTGCTGC CCCAGGAGAT GTTCGAAGGG CTGAACGCCA CCTGGCTGGA ACTACAGTCG
CTCAGCTATG CGAGGCTGGT TGATTGGGGC TTCCGCGAGT TCTTCGAATG GGTCAAGGAG
CGGTCCCACC AGTTCCTCGG CACCACCATC GGCACCATGC TTCAGACCGA TGGCTTCCAT
TTCACCCGGC TGGGCACCTT TATCGAGCGC GCCGACAACA CCGCCCGCCT GCTCGATGTG
AAATACCACG TGCTGATGCC CGACGAGAAC CGCCTGGACG AGGCGGTGGA TTACTACCAA
TGGGGGGCGG TGTTGCGCGC CATGTCGGCG CTGAAGGCCT ATCGCATGGT CTACCGCGAC
ACCATCAAGC CCCGTCAGGT CATCGACCTT CTGACCCTGA AGCGCGAATT CCCGCGTTCG
CTGCATCTGT GCTACGAGAA CCTGCACGAT TTGCTCGAAC ATCTGGCCCC CGGCGCCGAA
TGCACGCGGC TGACCGGCGA GATGCACGCC AAGCTGCGCT ATGGCCGGAT CCAGGACATC
ACCCGGCGCG GCCTGCACCG CTTCCTGACC GATTTCATCA CCCATAACGC CGCCGTCAGC
GCCGAAATCG GCCGCACCTT CCATTTGGTC GCCGATATCG GGGTTCAAAC GCCGGTTAAG
GAGGCCAAAG AGGCCAAACG CGCCGATGAC GGCGGCGAAG CTGAAGAGGC CGGCTCCGTG
CAGCAGCAAA GACAATAG
|
|---|
| Protein sequence | MLSRTADNLY WMTRYVERAE NMARILDVSY RMSQLPRNGT DAAVEWEPAL IISGQKPDFE
TRFEEITAGN VIAYMALDPE NPSSIVSTLH AARENARAER FVLPQEMFEG LNATWLELQS
LSYARLVDWG FREFFEWVKE RSHQFLGTTI GTMLQTDGFH FTRLGTFIER ADNTARLLDV
KYHVLMPDEN RLDEAVDYYQ WGAVLRAMSA LKAYRMVYRD TIKPRQVIDL LTLKREFPRS
LHLCYENLHD LLEHLAPGAE CTRLTGEMHA KLRYGRIQDI TRRGLHRFLT DFITHNAAVS
AEIGRTFHLV ADIGVQTPVK EAKEAKRADD GGEAEEAGSV QQQRQ
|
|---|
| |