| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3287 |
|---|
| Symbol | |
|---|
| ID | 3836734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 3782923 |
|---|
| End bp | 3783759 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637827403 |
|---|
| Product | sigma-24 (FecI) |
|---|
| Protein accession | YP_428369 |
|---|
| Protein GI | 83594617 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCATC GCTCCGCGCC CCGCAACGGG CTCGCCTCGG CCAGCTTTTC CCAGTCCCCG
GCCCCGCCTG TGGCGCCCGG CGCCACGACC TCCATTGCGC CCGACCCCGA CCTGGAAGAC
GAGGCGCTGG CTTGCGACGG CTCGTCCCAG GCCCCCTCCG ACACCGAAGA GGCGCGAGAG
GAGGCCGAGA CCTCGGAAAA CCAGTTGTTC GAGAACCAGA ACCGCGATGG GGGCGAGGCG
CCGGCCCGCC GCCGGGACCG CGAGAGTCTG CCGCCGGCGG TTTTCAACAA GCTGCTCATC
GACAGCCTGC CCCATATGCG CGCCTTCGCC CGCTCACTGA CCGACGACCG GGCCCTGGCC
GATGATCTGG CCCAGGAAGC CGCCACCCGC GCCCTGGCCA ACCGCGACAG CTATCACGCC
GGAACCAATT TCCGCGCCTG GATCTTCACC ATCGTCCGCA ACTGTTTTTA TTCCGAGCAT
CGTCGCAAGT GGCGTCGCAT GGAAAAGGGC AATGAAGACG CGATGATCCG CGCCGGCGCC
CCGGAAACCC AGGAAAGCGG CCTGCGCATG GAGGATTTCA AGCGCGGCTT CACCTTGCTG
TCGGAAGAAC AGCGCGAAGC CCTGGTTCTG GTCGGAGCCT GCGGCTTTGA TTATCAGCAA
GCCGCCGAGA TCGCCGGCTG CGCCGTCGGC ACCATGAAAA GCCGTGTTTC GCGGGCCCGG
GCCGAATTGC GCACCATGCT CGACGAGGAC GCCCTCAAGG GCGACCGCTC CGACTTCGCA
AAATTGGCCA AGGGAGGCTT CGAAGATCAG TTGGATCGGT CCTTGGGCCT GAAATGA
|
|---|
| Protein sequence | MTHRSAPRNG LASASFSQSP APPVAPGATT SIAPDPDLED EALACDGSSQ APSDTEEARE
EAETSENQLF ENQNRDGGEA PARRRDRESL PPAVFNKLLI DSLPHMRAFA RSLTDDRALA
DDLAQEAATR ALANRDSYHA GTNFRAWIFT IVRNCFYSEH RRKWRRMEKG NEDAMIRAGA
PETQESGLRM EDFKRGFTLL SEEQREALVL VGACGFDYQQ AAEIAGCAVG TMKSRVSRAR
AELRTMLDED ALKGDRSDFA KLAKGGFEDQ LDRSLGLK
|
|---|
| |