Gene Rru_A3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3168 
Symbol 
ID3836614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3660603 
End bp3661643 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID637827283 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_428250 
Protein GI83594498 
COG category[R] General function prediction only 
COG ID[COG4239] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGCTC TGCTCACCCT CACGCCGCTG ACCCGCCGCC GGCTCGCCGC CTTTCGCCGC 
AACCGCCGGG GCTTCCATTC CCTGTGGATC TTCCTCACCC TGTTCATCAT CAGCCTGGGC
GCCGAACTGG TCGCCAACGA CAAGCCGCTG GTGCTGTCTT ACAAGGGCGA TCTTTATTTT
CCGGTGCTGA AGGACTATCC CGAAACCACC TTCGGCGGCT TCTTTCCCAC CACCGCCGAT
TACCGCGACC CCTATGTCGC CGAGGCCATC GCCAACGATG GCTGGACGGT TTGGCCACCG
GTGCGCTTCG CCTATGACAC CGTCAACCGC ACCCTGGACC GGCCGGTGCC CTCGGCGCCG
ACCTGGGACA ATCCGCTGGG CACCGACGAT CAGGGCCGCG ACGTTTTCGC CCGCCTGCTT
TATGGCTTCC GGCTGTCGGT GTTGTTCGGC TTGGCTTTGA CCGCGCTGTC ATCGCTGATC
GGCGTGGCCG CCGGCGCGGT GCAGGGCTAT TTCGGCGGCT GGATCGACCT GCTGGCCCAA
CGCGTCCTGG AGATCTGGGG CGGTTTGCCC CAGCTTTTCG TTCTGATCAT CGTCGCCAGC
GTCATCCAAC CCGGCTTCTG GACGCTGCTG CTGATCTTGC TGCTGTTCTC CTGGACCGCC
CTGGTCGGCG TCGTCCGCGC CGAATTCCTG CGCGGGCGCA ATTTCGATTA CGTCCGCGCC
GCCAAGGCGC TGGGCATGTC CGACACCAAG ATCATGATCA AGCACGTTCT GCCCAACGCC
ATGGTCGCCA CCTTGACCTT CGCGCCGTTC ATCCTGTCGG GATCGGTCAC CGCGCTGACC
GCGCTGGATT TCCTGGGGCT GGGCATGCCG CCGGGTTCGC CGTCGCTGGG CGAGCTGCTG
CGGGTGGGCA AGGAAAACCT CCAGGCGCCC TGGCTTGGCT TCACCGGCTT CATCGTTCTC
GCCGCCATGC TGACCCTGTT GGTTTTCATC GGCGAGGCGG TGCGCGACGC CTTCGATCCG
CGCAAAGGGG CCGACCGATG A
 
Protein sequence
MVALLTLTPL TRRRLAAFRR NRRGFHSLWI FLTLFIISLG AELVANDKPL VLSYKGDLYF 
PVLKDYPETT FGGFFPTTAD YRDPYVAEAI ANDGWTVWPP VRFAYDTVNR TLDRPVPSAP
TWDNPLGTDD QGRDVFARLL YGFRLSVLFG LALTALSSLI GVAAGAVQGY FGGWIDLLAQ
RVLEIWGGLP QLFVLIIVAS VIQPGFWTLL LILLLFSWTA LVGVVRAEFL RGRNFDYVRA
AKALGMSDTK IMIKHVLPNA MVATLTFAPF ILSGSVTALT ALDFLGLGMP PGSPSLGELL
RVGKENLQAP WLGFTGFIVL AAMLTLLVFI GEAVRDAFDP RKGADR