Gene Rru_A3115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A3115 
Symbol 
ID3836561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3592310 
End bp3593335 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content65% 
IMG OID637827230 
ProductATPase 
Protein accessionYP_428197 
Protein GI83594445 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3267] Type II secretory pathway, component ExeA (predicted ATPase) 
TIGRFAM ID[TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.787469 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCTGG ATTTCTACGG TCTTCATGCC CATCCCTTCC AATTGACGCC CGATCCCGCG 
TTCTTTTTTG GGGCGAATGG GCATACGCGG GCGAAATCCT ATCTGATGTT CGGCCTGAGC
CAGGGGGAAG GCTTCGTCGT GGTCACCGGC GATGTCGGGG CGGGCAAGAC CACTTTGCTG
TCGCATATGC TGCGATCGCT GTCGGATCGG AGCATCCGCG TCGCCCGGCT GTCGACCACC
CAGCTCAGCG CCGATGACAC GGCCCGGGTG GTCGCCCGCG CCTTCGGCCT TGCCGAGCCC
GCCCATCCGA GCAAGGGGGC TTGGCTGGAG GCGATCGAAG TTTTTCTCAC CCAGGTCCGC
GCCGCCGGCG AACGCTGCGT TCTGATCGTC GACGAGGTTC AGAACATGGG CTTCGCTGCC
CTGGAAGAAC TGCGGATGCT GGGCAACTTG GGGATCGACG ACGGCCATTC GGCCCTGCAG
ACGATCCTGG TCGGCCAGCC GCAGTTCCGC AACACCCTGG CCGGTCCCAG CCTCGATCAA
TTGCGCCAGC GCATCGTCGC CTCGTGTCAT CTGGGGCCGA TCGAGCCCGA GGAGGTCGGC
CACTACATGC GCTATCGCCT GACCCAGGCG GGATGGCGGG GCGATCCGTC GTTCGAGGAG
GCGGTGTTTC CGGCGGTCTA TCGCCACAGC GGCGGTTTGC CGCGGCGGAT CAATATTTTG
TGTTCGCGGC TGCTGCTTGC CGGCTTCCTT CAGGAACGCC ACGACCTGCG CGCCCAGGAT
GTGGAAGAGG TCGCCGCCGA ACTGGAGGCC GAGGCCGGCG AGGTGATCGG GGTGGCCGGG
GAGACCCGGG CCGGCGCCCG GCTGGACGGC CGCTTCATCG ACGCCGGATC GCTGGCCGAT
CTTGAGGAGC GGGTGCTGGG CATCGAGGAA CGCCTGCGCA AGGTCGATCT GGTGGTGCGG
CGGGGCTTGC TCAATTTTTC CGATTTCGTC TCTGAACTGA ACGCTGTCTG GAAAGGCCGG
CCCTGA
 
Protein sequence
MYLDFYGLHA HPFQLTPDPA FFFGANGHTR AKSYLMFGLS QGEGFVVVTG DVGAGKTTLL 
SHMLRSLSDR SIRVARLSTT QLSADDTARV VARAFGLAEP AHPSKGAWLE AIEVFLTQVR
AAGERCVLIV DEVQNMGFAA LEELRMLGNL GIDDGHSALQ TILVGQPQFR NTLAGPSLDQ
LRQRIVASCH LGPIEPEEVG HYMRYRLTQA GWRGDPSFEE AVFPAVYRHS GGLPRRINIL
CSRLLLAGFL QERHDLRAQD VEEVAAELEA EAGEVIGVAG ETRAGARLDG RFIDAGSLAD
LEERVLGIEE RLRKVDLVVR RGLLNFSDFV SELNAVWKGR P