| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A3056 |
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| Symbol | |
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| ID | 3836502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3518796 |
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| End bp | 3520256 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637827171 |
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| Product | major facilitator transporter |
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| Protein accession | YP_428138 |
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| Protein GI | 83594386 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.150978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCCG TTCCCCCCGC CGTTCCCCCG TCTTCGCCTT CTCCCGTGCC GTCTTCCGCC
CCCCGATCCG CGCCGACCTC GGCCGCCTTG TCCTATCTGG TGGCCGGCGC CTTTTTCATG
GAAGCCCTGG ACGGCACGGT GGTCATCACC GCCCTGCCGC AGATGGCGGC ATCCTTCGGC
GCCGCGCCGG TCGATCTCAA TATCGGCGTT TCGGCCTATA TCCTGACCGT CGCCATCCTG
ATCCCGGCCA GCGGCTGGGC GGCCGAGCGC TTTGGGGCGC GGACGGTCTT CGCCCTGGCG
ATCACCGTCT TCACCCTGGC CTCGATCCTT TGCGGTCTCA GCCAGGACCT GTGGTCGTTC
GTCGCCGCGC GCATCTTGCA AGGGGTGGGC GGGGCGATGA TGGTGCCGGT CGGCCGGCTG
GTCGTGCTGC GCGATACCCA AAAATCCGGG CTGATGCGGG CGATCGCCAT CATCACCTGG
CCCGGTCTGG TCGCCCCGGT GCTGGGGCCG CCGATCGGCG GCTTCCTGGC CACCCATGCG
TCCTGGCACT GGATCTTCTT TCTGAATGTG CCGCTGGGGA TCCTGGCGCT GATCCTGACC
CTGGTTCTGG TGCCGCGCGG CCGCCGTGAT AGCCCCGGCC CCTTCGATGG CCTGGGCTTT
GTTCTCAGCG GTACGGCCTG TTTCTGCCTG ATCTACGGCC TGGATCTGAT CAGCCGGGGC
GAGGTCTGGA CCTCGGGGGC GCTTTGTTTG GTCGGATTGC TTGGCGGTTT TCTCGCCTTG
CGCCATTCCC GCCACCACGA GCGGCCGCTG ATCGACCTGT GGGCGATGCG CCAGCGAAGC
TTCGCCGTGA CCATTTTCGG CGGCACGCTG TTTCGCCTGA CGCTGAGCGC CACGCCGTTC
TTGCTGGCGC TGCTGTTTCA GTTGTCCTTC GGCATGGACG CCTTCGCCTC GGGCCTGCTG
GTTCTGGCGA TTTTCGTCGG CAATCTGGCG ATGAAGCTGC TGACCTCGCC GATTCTGCGC
CGCTTCAGCT TTCGCGCCAC CTTGCTGGTC AATGGCGGGC TGAACGCCCT GACCATCTTC
GCCTGCGCCC TGCTTGACGC CGCAACGCCG ACGGCGGTGA TCCTGGGCCT GCTGTTCGTC
AGCGGGCTGA CGCGCTCGCT GCAGTTCACC GCGCTCAACA CCTTGGCCTT CGCCGATGTG
CCCCAGGAGC GGATGACCGG CGCCAATACC CTGGCCAATG TCGCCCAACG CATGAGCGGG
GCGCTGGGCG TGGCCTGTGG CGCCGTGGCC CTGCGGCTGG CCGGGGCGAT CGGCGAGGGC
GCCGCCACGC CCCTTGAGCT GGCCGATTTC CGCTTCGCCT TCGTGCTGAT CGGGGTGATT
TCCCTGCTCG GGCTGCTTGA TGTCATCGGT TTGCGTCGCG ATGCCGGCGA CGAGGTGCGC
GGCGTCATCG CCGCGCGCTG A
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| Protein sequence | MSAVPPAVPP SSPSPVPSSA PRSAPTSAAL SYLVAGAFFM EALDGTVVIT ALPQMAASFG
AAPVDLNIGV SAYILTVAIL IPASGWAAER FGARTVFALA ITVFTLASIL CGLSQDLWSF
VAARILQGVG GAMMVPVGRL VVLRDTQKSG LMRAIAIITW PGLVAPVLGP PIGGFLATHA
SWHWIFFLNV PLGILALILT LVLVPRGRRD SPGPFDGLGF VLSGTACFCL IYGLDLISRG
EVWTSGALCL VGLLGGFLAL RHSRHHERPL IDLWAMRQRS FAVTIFGGTL FRLTLSATPF
LLALLFQLSF GMDAFASGLL VLAIFVGNLA MKLLTSPILR RFSFRATLLV NGGLNALTIF
ACALLDAATP TAVILGLLFV SGLTRSLQFT ALNTLAFADV PQERMTGANT LANVAQRMSG
ALGVACGAVA LRLAGAIGEG AATPLELADF RFAFVLIGVI SLLGLLDVIG LRRDAGDEVR
GVIAAR
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