| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2928 |
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| Symbol | |
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| ID | 3836369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 3373350 |
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| End bp | 3374393 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637827040 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_428012 |
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| Protein GI | 83594260 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.7039 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA GATTTTTGAT CAGCGCCGCC TTGTTGAGCG TGGCGGCCTA TGCGGGATCA
TCGTTCCTTC ATAGCGAGAC GCCGCCTCCG GCCAAGCCAG CGAGCGAGAT CCTGAGCGTC
ACGGTGACGG CCCCCCGCGA GGAGACGGTC GTCGAGCGGG TCGGGACCAC GGGAACCCTG
GTCCCGCGCG AGGAAATCGT CGTGATGGCC GAGGTCTCCA ACGCGCGCAT CCTGAGTTTG
GCCGCCGAGG TCGGCGATCA GGTTCAAAAG GGCCAAAAAC TGGCCGTTCT CGACACCGAA
AGCCTGCTCT TGCAGGTCGC GCAGATGGAG GCGGAGTACA CCAAGGCGCG GGACGAATTC
GTTCGGGTCG ACTCGATCAA GGAGAGCGGC GCCGTCAGCA AGAGCCTGCG CATCGAGAAG
AAGACCGCGC TCGACACGAT GACGGCCAAG CTGCAGGAGG CGAAGCTGGC GGTGAGGCGC
ACCGTTATCA CGGCTCCGGC CAGCGGAACG GTCTATGAGC GCCGCGCCGT CGTCGGCGGT
TTGTCGAGCC AGGGCGATCC GCTTTTCCGC ATTGCCGGGA AGGGCGAGAT CGAAGCGGAT
CTGCGCGTTC CAGAGGGGGT GGCGGGCCGG GTATCGGTGG GGCAAGCCGT CAGGCTCTCG
CTGCCGGGGC TGAAGGCCCC GCTGACCGGC ACGGTGCGGC TGGTGGCGCC ACGGATCGAC
GCCTCCGACC GCTCCGCCTC GGTTCGCGTT TCGGTCCTCA CCGGCCAAGC CTTGATGGTT
GGCGCTTTCG TCCATGCCGA CATCGACCTG GGCGAGGTCA CGGGCCTGGC CGTTCCCACC
ACGGCCATTC AGCGCGATAG CGAAGGCGCC TTCATGTGGA CGGTGAAAGG GGACGGCGGT
GTCGCCCGCT TGGCGGTGAC GCCGCTTCTC GAACGCGATG GCCTGACCTT GGTCGGCGAC
GTTTCCCCCG ACCTGCGCGT CGTCGCCAGG GCGGGAGGGC TCGTGCGTGC CGGTGACATC
GTGAAGACGC TGGAGGCGCG CTGA
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| Protein sequence | MNKRFLISAA LLSVAAYAGS SFLHSETPPP AKPASEILSV TVTAPREETV VERVGTTGTL
VPREEIVVMA EVSNARILSL AAEVGDQVQK GQKLAVLDTE SLLLQVAQME AEYTKARDEF
VRVDSIKESG AVSKSLRIEK KTALDTMTAK LQEAKLAVRR TVITAPASGT VYERRAVVGG
LSSQGDPLFR IAGKGEIEAD LRVPEGVAGR VSVGQAVRLS LPGLKAPLTG TVRLVAPRID
ASDRSASVRV SVLTGQALMV GAFVHADIDL GEVTGLAVPT TAIQRDSEGA FMWTVKGDGG
VARLAVTPLL ERDGLTLVGD VSPDLRVVAR AGGLVRAGDI VKTLEAR
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