| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2868 |
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| Symbol | |
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| ID | 3836308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 3302940 |
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| End bp | 3304607 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637826979 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_427952 |
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| Protein GI | 83594200 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTCG GCTCATGGAG CTTACGCGCC CAGGTCGGGT TGGTTTTCGG CTCGTTGGTT
ACCCTTGTCT GCACCGTTCT CGTCTGGACC TCCAACACCG TCCTTGAAGC CAAGGGCGAA
GAGGCCATCG GGGTTCAGTT ATCGTCCATT GCGTCGAACA TGGCCGATAA GTTCGACCGC
GGCATGATGT CGCGGATTTC CGAAATCGCT TTCGTCTCTA GCCTCGACTT GTTCCGCAAT
CCCTCGAATC CGCGCGCCAT CCGCCATACC CTCGACGATT TGCAAGAGGC CGTGCCCTAT
TTCACCTGGA TCGGCTTCAC CGATCCGACG GGAACCGTCA GGGCCGGCAC CAATGGCCTG
CTCGAGGGCG CCGACTTCAG CCAACGCGCG GTGTTTCAGC AAGGCATCCA GGGTCCCTTC
ACCGGCAACC TCCACGAGGC GCCGATGCTC GCCAAGGCTT TGGGGGCGTC GGGCGCCGAA
CCCATGCGCT TTCTCGACAT CACCTTTCCC GTGACCGATC TCGCCGGCGC GGTGGTCGGC
ATGCTGAGCG CCCATATCGA CTGGGCCTGG GCCCGCGAAC TCGAACACGC GGCCCTTGAA
AGCGCCCTCA GTCGCCAGGG GTTGGAGCTC TTGGTCGTTG ATCATGCGGG AACGGTGTTG
CTGCGTCCCG AAGGCCTCGC CCTACCCAAG ACGCTCGACC TCGAGGCCCT GCGCCACTCC
CAAACCCGCC CCAAGGGTTG GACCATCGAG ACGTGGCCCG ACGGCAAGGT TTATCTGACC
GGCTATGCCC GCCAGAGGGG CTACAAGGCC TTTGCCGGAT TTGGCTGGCG AATCCTCGCC
CGTCAGCCCG TCGAGATCGC TTTCGCTCCC TTGGCCGAGG TGCGCCACAC CCTGCTGCTG
GCCGGGGTGG TGGGCGGGGT AATCTTCGGG GCGATCGCCT GGATCACCGC CGGCGCCATC
GCCCGGCCGC TCAAACGGAT CACCGAGGCC GCCGACGGCC TGCGCGACGG CGCGGTGGGC
GCGGCCCTGC CCCATCTGAC CGGCAGCAAG GAGATCGAAC GGCTTTCCGA ATCCCTGCGC
CTGCTGATCA ATGCCCTGAC CGCCACCGAC CGCCGCATGG GGCGGATGGA AAAGCTCGCC
CATAACGACC TGTTGACCGG CCTGCCCAAT CGCGCCGCCC TTGGCGCCTA TCTCGACCGC
GTCGTTCCCG CCCTCAGCAA CGCCCAGGCC GCCATCGCCT TCCTGTATCT TGATCTCGAC
GGCTTCAAGG CGGTCAACGA CACCCTCGGC CACGGGGCGG GCGACGACCT GCTCAAGGCC
GCCGCCGGCC GCATCCTCGA CTGCCTGCGC CAAGGCGACA TGGCGATACG CCTGGGGGGC
GATGAATTCG TCGTCATCGT CAACACCTCG GCCTCAAGCT GGCGCCAGGA ATCGATCCGG
GTCGCCGAAA GGCTCCTTAC CGCCCTCGAT GGTCCCTTCG CCTTGCCCGG CGGCGTCCGG
GCGAAAATCG GCTGCAGCAT CGGCATCGCC GCCTGGCCCG ACGATCATTG CGACATCGAA
GGCGCCCTTC ACCACGCCGA TATCGCCCTG TATCAGGCCA AACGCCTGGG AAAGGGCCAA
TCGGTGGTCT ATGCCGACCT GCCGAAATCG GTCCTTCACG ACGGATAA
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| Protein sequence | MAFGSWSLRA QVGLVFGSLV TLVCTVLVWT SNTVLEAKGE EAIGVQLSSI ASNMADKFDR
GMMSRISEIA FVSSLDLFRN PSNPRAIRHT LDDLQEAVPY FTWIGFTDPT GTVRAGTNGL
LEGADFSQRA VFQQGIQGPF TGNLHEAPML AKALGASGAE PMRFLDITFP VTDLAGAVVG
MLSAHIDWAW ARELEHAALE SALSRQGLEL LVVDHAGTVL LRPEGLALPK TLDLEALRHS
QTRPKGWTIE TWPDGKVYLT GYARQRGYKA FAGFGWRILA RQPVEIAFAP LAEVRHTLLL
AGVVGGVIFG AIAWITAGAI ARPLKRITEA ADGLRDGAVG AALPHLTGSK EIERLSESLR
LLINALTATD RRMGRMEKLA HNDLLTGLPN RAALGAYLDR VVPALSNAQA AIAFLYLDLD
GFKAVNDTLG HGAGDDLLKA AAGRILDCLR QGDMAIRLGG DEFVVIVNTS ASSWRQESIR
VAERLLTALD GPFALPGGVR AKIGCSIGIA AWPDDHCDIE GALHHADIAL YQAKRLGKGQ
SVVYADLPKS VLHDG
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