Gene Rru_A2623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2623 
Symbol 
ID3836058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp3052161 
End bp3053261 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content67% 
IMG OID637826729 
Productchorismate synthase 
Protein accessionYP_427707 
Protein GI83593955 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGGCG ACAGCTTCGG AACGCTCTTC CGCTTCACCA GCTTTGGTGA AAGCCACGGG 
CCGGCCATCG GTTGCGTGGT CGAAGGGGTG CCACCGGGCA TTCCCTTGAC CGCCGCCGAT
CTGCAACACG ACCTTGACCG GCGCAAGCCC GGCCAGTCGC GCTTCACCAC CCAGCGCCGC
GAGGACGATG CCGCCGAGAT TTTGTCGGGG GTTTACGAGG GGGTGACGAC GGGCACGCCG
ATCGCCGTGC TGATCCGCAA TACGGACCAG CGCTCGAAGG ATTATTCCGA TATCGCCCAG
CGCTTCCGCC CGGGGCATGC CGATTACACC TATTGGGTCA AATACGGGGT GCGCGATCCG
CGCGGCGGGG GGCGCTCCAG CGCCCGCGAG ACCGCCGTGC GCGTCGCCGC CGGAGCGATC
GCCCGCAAGG TCTTGACCAG CGTGCTTGGC CGGCCGTTGA CCATCCGCGC CGCCGTGGTG
GAAATGGGCG GGCTGGCGAT CGAGCGGGCC AATTGGGATT GGCTTAGCGT CGACGCCAAT
CCGTTCTTCA GCCCCGATGC GGCTATGGTC GCGCCGTGGG AGGCCTTGCT TGACGGGGTG
CGCCGGGATG GCTCCAGCGT CGGGGCGGTG GTCGAGGTTG TGGCCGAAGG CGTGCCGCCC
GGACTGGGCG AGCCGGTTTA TGACCGGCTG GATGCGGATC TGGCCAAGGC CCTTATGAGC
ATCAACGCCG TCAAGGGCGT TGAAATCGGC GCCGGCTTCG AAGCCGCCCG CTTGCGCGGC
GAAAGTAACG CCGACGAGAT GCTGCCCAAC GGCCTGGGCG GTGTGCGCTT CACGTCCAAT
AACGCCGGCG GCGTGTTGGG CGGTATTTCC ACCGGGCAGA CGATCATCGC CCGACTGGCG
GTCAAGCCGA CCAGTTCAAT CATGATCCCG CGCCAGAGCG TGGATACCCA GGGGCGGCCG
GTCGATGTGG TGACCAAGGG TCGGCATGAT CCTTGTGTCG GCATTCGGGC GGTGCCGGTG
GCCGAGGCCA TGGTCGCCGT TGTTCTGGCC GATCATCTTC TGCGCTTTCG CGGCCAGTGC
GGTCTGCCCG TCGGGCTGTG A
 
Protein sequence
MAGDSFGTLF RFTSFGESHG PAIGCVVEGV PPGIPLTAAD LQHDLDRRKP GQSRFTTQRR 
EDDAAEILSG VYEGVTTGTP IAVLIRNTDQ RSKDYSDIAQ RFRPGHADYT YWVKYGVRDP
RGGGRSSARE TAVRVAAGAI ARKVLTSVLG RPLTIRAAVV EMGGLAIERA NWDWLSVDAN
PFFSPDAAMV APWEALLDGV RRDGSSVGAV VEVVAEGVPP GLGEPVYDRL DADLAKALMS
INAVKGVEIG AGFEAARLRG ESNADEMLPN GLGGVRFTSN NAGGVLGGIS TGQTIIARLA
VKPTSSIMIP RQSVDTQGRP VDVVTKGRHD PCVGIRAVPV AEAMVAVVLA DHLLRFRGQC
GLPVGL