Gene Rru_A2515 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2515 
Symbol 
ID3835949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2923708 
End bp2924829 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content64% 
IMG OID637826623 
Productextracellular solute-binding protein 
Protein accessionYP_427602 
Protein GI83593850 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTTT CGCGTCCCTT GGGCCAAGAC CCCGCGCCTT GGCCGGTCCC GCCGGCAAGC 
CGGCCCCCCT TTTGGTTTCA AGGCCGATCG CCCCGCCCTG GTCTGGCCTT CGCCTTTGGC
CTTGTCGCCG CCCTGACCCT GGCCGCGCCG GCGCTGGCCG CCAATGGCGA CACGTTGACC
TCCATCCGCG ACCGGGGCAG CGTGACCTGT GGCACCAATC CCATTCCCGG GTTCGGCTTT
CCCGACTCAG ACGGCAATTG GCGGGGCTTT TTCATCGATT TTTGCCGGGC CCTGGCGGCG
GCGACCCTTG GCGACCCGAC CGCCTTCGAG GTCGTTCCCG TCGAGTCAAA CAGCCGCTGG
GAGGCCCTCA ACAGCCATAC CACCGATGTG AACGTCGATG GCTCGACCTG GACGCTGAGC
CGCGATACGG CGCTCGGCTT CGATTTCCCA GGGGTGCTGA TCTACGATGG CCAACGGTTT
CTGGCCAAGC CCTCGGTGCC GGAGGGATCG GTGAAGGCGG CGGCCGGTTT GCGCGTGTGC
ATCATCATGG GCACGACGGC GGAAGTGAAC CTGCGCGATT TCCTTAAGAA AAACGATCTT
GAGATGACGG TGATCGCCAC CGAATCCGAC GAGGGCGCCT GGACCTCCTT CCTGAAAGGC
CGCTGCGAGC TGTTCGTCAA TGACGGCATC GGCCTCGCCC TGCGCAACGC CCTGCATATG
ACGCCACCGC GCGTCAACCA CCTGATGACC GAAGCGATTT CCAAGGAGCC GCTCGGTCCG
GTGGTCCGCG GCGATGATCA TCAGTGGTTA GAAATCAACA GATGGGTTCT TAACGTGCTG
ATCGCGGCCG AAGAAGCCGG AATATCCTCG ACAACCCTTG TCGATCCGTC CCCCACCGCC
GACTTGTCTT CCGAGGATCG CGTTTTTGTC GGGGGCCCGG AGGACAATGC CGCCGCCCTT
GGCCTGGAAC CGGGATGGGC AAGACGGGTT ATCGCCGCGG TCGGCAATTA TGGTGAGGTG
TTCGACCGCA ATTTGGGAAA AGGCTCGGAG ATCGGCCTTG ACCGGGGCGT GAACGCGTTG
TGGTCCGAAG GCGGGTTGAT GATTTCACCG CCGCTGCAAT AG
 
Protein sequence
MSLSRPLGQD PAPWPVPPAS RPPFWFQGRS PRPGLAFAFG LVAALTLAAP ALAANGDTLT 
SIRDRGSVTC GTNPIPGFGF PDSDGNWRGF FIDFCRALAA ATLGDPTAFE VVPVESNSRW
EALNSHTTDV NVDGSTWTLS RDTALGFDFP GVLIYDGQRF LAKPSVPEGS VKAAAGLRVC
IIMGTTAEVN LRDFLKKNDL EMTVIATESD EGAWTSFLKG RCELFVNDGI GLALRNALHM
TPPRVNHLMT EAISKEPLGP VVRGDDHQWL EINRWVLNVL IAAEEAGISS TTLVDPSPTA
DLSSEDRVFV GGPEDNAAAL GLEPGWARRV IAAVGNYGEV FDRNLGKGSE IGLDRGVNAL
WSEGGLMISP PLQ