| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2244 |
|---|
| Symbol | |
|---|
| ID | 3835672 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2603717 |
|---|
| End bp | 2606197 |
|---|
| Gene Length | 2481 bp |
|---|
| Protein Length | 826 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637826346 |
|---|
| Product | glycogen/starch/alpha-glucan phosphorylase |
|---|
| Protein accession | YP_427331 |
|---|
| Protein GI | 83593579 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0058] Glucan phosphorylase |
|---|
| TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.238085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGG TGATCCGCAC CGATTTCGAG CTCGACGAGG GGATCGACTT CACCGACGTC
GAGCAGATCA AGCACGGGCT TGTCACGTCG ATGGTCCGTG GGGTCGGCTT CGATCCGGCT
TCGGCGACCG AGCACGATTG GTTTCTCGCC CTGGCCAGCC TGTTGCGCGG CCATCTCAGC
GAAAAGGGCA TGATGACGTC GCGCGCCCAA TACGGCAGCG ATACCAAGCG CGTCTATTAT
CTGTCGCTGG AGTTTCTGAC CGGACGGCGG CTGGTCAAGC ATCTGCTCGA TCTTGGCATC
GAGTCGGCGG TGCGCGCCGC CTTGCGCGAA CTGGGCCAGG ATCTGGACCG GGTGGCCGAG
CAGGAAAGCG ACGCGGCCTT GGGCAATGGC GGCCTTGGCC GGCTGGCCGC CTGCTTCCTT
GATTCCATGG CCACCCATGG CTATCCCGGC TATGGCTACG GCATCCGCTA TGAATTCGGC
ATGTTCTCGC AGACCATCGA AAACGGTCAG CAGGTCGAAC ATCCCGAAAG CTGGCTGCGC
AACGGCAATC CCTGGGAAAT CGTTCGCCAC AACGTCAGCT ATCCGGTGCG CTTTGGCGGC
CACATCGTCT GCTTCCGCGA CGAAGGCGGC GAGGAGCGCT GCCGCTGGGT CGACGCCAAC
GAGGTGATCG CCGAGGCCTA TGACCTTAAG GAAACCGGCT ACGGCGGCGC TTACGGCTGT
AATCTGCGCC TGTGGTCGGC CCGCGCCACC CAGGATTTCG ACCTGAGCTA TTTCAACGAA
GGCAACTATA TCGAGGCGGT CAAGGACAAG ACCACCAGCG AGAACCTGTC CAAGGTGTTG
TATCCTATGG ACACGACGCT GATGGGGCAG GAACTGCGGC TGAAGCAGGA ATATTTCTTC
GTTTCCGCCT CGCTGCAAGA CATCCTCGCC CGCTTCTTCA AGGTCCATAA GGACCCCAAG
CAGATCCCGG CGAAGATCGT CATCCAGCTC AACGACACCC ATCCGGCCCT GGCGGTGCCC
GAGATGATGC GGCTGTTGAT GGATAATCAC GCCTTGTCAT GGGATGCCGC CTGGGACATC
ACCCGCGACA CCTTCGCCTA TACCAATCAC ACCTTGCTGC CCGAGGCCCT GGAAACTTGG
CCGGTGGCGA TGCTCGAAGC GATTTTGCCC CGCCATCTCG AGATCATCTA CAAGATCAAC
TACGGCTTCC TTCAGCAGGT CCGCCGCGCC TTCCCCGGCG ATGTCGCCAT GCTGCGCCGC
ATGTCGCTGA TCGACGAGGA TACCCACCGG GTGCGCATGG CCCATCTGGC GGTGGTTGGC
AGCCGGCGGG TCAATGGCGT GGCGGCCCTT CACACCAAAC TGCTGCGCGA GCGGGTCTTC
CCCGATTTCG ATGCCTTCTT CCCCGAGAAA TTCGTCAATG TCACCAACGG CATCACCCAG
CGCCGCTGGC TTTTGCAGTC AAATCCGCCG CTTGCCGCCC TGGTGAGCGA GACGATCGGC
GAAGGCTGGT TGACCGATCT CGACCGCCTG CGCGATCTGG AGAAGTTGGC CGACGATCCG
GCCTTCCAGG ACCGCTTCCT GACGATCAAG GCCGGCGCGA AGGCCCGGGC GGCGGCTTTG
ATCGCCGAGC GCTGCGGCGT CGTCGTCTCC ACCGCCTCGC TGTTTGATAT CCAGATCAAG
CGCATTCACG AATACAAGCG CCAGCTGCTC AACATCATGC AGGTGATCGC CCGCTATAAC
GCCATCCGCC GCGATCCCAA GGCGGTCATG ACGCCGCGCA CGGTGATCTT CGGCGGCAAG
GCGGCGCCCG GGTATTACGT CGCCAAGAAG ATCATCCGCC TGATCAACGA TGTCGCCGAG
ACCATCAACC ACGATCCGGC GGTGCGCGAT CTGTTGAAGG TGGTCTTCGT TCCCAATTAC
AACGTCTCGA CCGCCGAGAT CCTGATCCCG TCTTGCGATC TGTCCGAACA GATCTCGACC
GCCGGCACCG AGGCTTCGGG AACGGGCAAC ATGAAATTCG CCCTCAACGG CGCTTTGACC
ATCGGCACCC TGGACGGCGC CAATATCGAA ATCCGCGAAG AGGTCGGCGA CGACAATATC
TTCATCTTCG GCCACACCGC CCAGGAGGTT TCGCAGATCA AGGCGCAGGG CTACGATCCG
TGGAGCTGGT ATGCGGCCGA TGACGAGATG CGCACGGTGA TCGATATGAT CCGCGACGGC
TTCTTCTCGA CCGAGGAACC CGACCGCTAT CGGCCGATCG CCGATGCCCT GCTGGGGTCC
GATACCTATC TGGTGCTGGC CGATTTCCGT TCGTATATGG ATGCGCAAAA GGCGGTGGAC
GGGCTTTACA CCAACCAACG CGTCTGGGCG CGTCAGGCCA TCCTCAACAT CGCCCGGGTT
GGCAAGTTCT CGTCCGACCG GGCGATCCAT ACCTATGCCA AGGATATTTG GGGCGTGCGG
CCGATGGACG CCCTCTCCTG A
|
|---|
| Protein sequence | MDTVIRTDFE LDEGIDFTDV EQIKHGLVTS MVRGVGFDPA SATEHDWFLA LASLLRGHLS
EKGMMTSRAQ YGSDTKRVYY LSLEFLTGRR LVKHLLDLGI ESAVRAALRE LGQDLDRVAE
QESDAALGNG GLGRLAACFL DSMATHGYPG YGYGIRYEFG MFSQTIENGQ QVEHPESWLR
NGNPWEIVRH NVSYPVRFGG HIVCFRDEGG EERCRWVDAN EVIAEAYDLK ETGYGGAYGC
NLRLWSARAT QDFDLSYFNE GNYIEAVKDK TTSENLSKVL YPMDTTLMGQ ELRLKQEYFF
VSASLQDILA RFFKVHKDPK QIPAKIVIQL NDTHPALAVP EMMRLLMDNH ALSWDAAWDI
TRDTFAYTNH TLLPEALETW PVAMLEAILP RHLEIIYKIN YGFLQQVRRA FPGDVAMLRR
MSLIDEDTHR VRMAHLAVVG SRRVNGVAAL HTKLLRERVF PDFDAFFPEK FVNVTNGITQ
RRWLLQSNPP LAALVSETIG EGWLTDLDRL RDLEKLADDP AFQDRFLTIK AGAKARAAAL
IAERCGVVVS TASLFDIQIK RIHEYKRQLL NIMQVIARYN AIRRDPKAVM TPRTVIFGGK
AAPGYYVAKK IIRLINDVAE TINHDPAVRD LLKVVFVPNY NVSTAEILIP SCDLSEQIST
AGTEASGTGN MKFALNGALT IGTLDGANIE IREEVGDDNI FIFGHTAQEV SQIKAQGYDP
WSWYAADDEM RTVIDMIRDG FFSTEEPDRY RPIADALLGS DTYLVLADFR SYMDAQKAVD
GLYTNQRVWA RQAILNIARV GKFSSDRAIH TYAKDIWGVR PMDALS
|
|---|
| |