Gene Rru_A2211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2211 
Symbol 
ID3835639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2568810 
End bp2569898 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content62% 
IMG OID637826313 
Productporin 
Protein accessionYP_427298 
Protein GI83593546 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAATG AGGAAAAGCA CATGAAAAAG GTTCTCTTCG GCACCACCAT GTTGGTTGCC 
GCTGGCGCTT TCGCCGGAGC CGCCGTTGCC GCCGACCCGA TCACCCTGAA GCTGGGTGGT
AAGCAGGAGC AGTACTTCGG TGGCGTCGCC TCCACGAAGG ACGGTGGCCG TGAGGACGGC
TTCGGTATCG ACACCGACAC CGAAGTGTAC TTCTCCGGTT CGACGACCCT CGACAACGGC
ATCACCGTCG CCGCCCGCAT CGAGCTCGAG GCCGAGGCCG ACAACGCCAA CAACGCCGAC
AAGCAGTGGG TCACCGTTTC TGGCGCTTTC GGTAAGATCG AAGCCGGTCA GCGTTCGGGC
GTGTTCGACG AGTTCATGGT CGTCGCTCCG ACTGTTGGGT CTGTCTCTCT CGACGACTCG
AAGAGCTGGC TTGGTGCCGG CAACGGTATT AATGGCAGCG TCACTCAGCT TTACCTCGAT
CAGTCGCTTG ACGATGACGA CGCCAAGGTC ACCTATGTGA CCCCGCAGTT CTACGGCTTC
AGCGCCGGCG TGTCGTACAC CCCGAACGTG GGGGGCCCGC GCGCCAACAA CTCCTCTATC
GTCGCCCCGA CCAAGAAGAA CCGCGATCTG GTTCAGATGG CCGTTGGCTA TGACGCCGAG
TTCGGTGACG TCGGCCTGAA GGCCAGCGCC GCTGCCGCGA CCCAGTCGAA CCTGTGGATC
TACCAGGGCG GCGTGAACGT GTCGTATGCC GGCTTCACCC TGGGTGGCGC CTACACCGAA
TACGACGATC AGTCGGCTGC CGCTGTTGCC AGCTGGGACG CTGACGCCAG CGAAGGTCGC
GTGTGGACCG CTGGTCTGTC CTATGCCGTT GGCCCCTACA GCGTCGGCTT CACCTACGGC
CAGACCGACA ACGACAGCAA GTCCGGTGTG GATGCCGCGA TCTATAAGAT CGGTGGCGAC
TACAAGATGG GCCCGGGCAT CGATCTGGTC GGCAACGTGT TCTACGGCGA GACTGGCATC
GGTTCGTCCA ATGTCGACGC CAGCCGTGAA GGCTTCGGCG CCGTCACCGG TATCGTCCTG
GCGTTCTAA
 
Protein sequence
MVNEEKHMKK VLFGTTMLVA AGAFAGAAVA ADPITLKLGG KQEQYFGGVA STKDGGREDG 
FGIDTDTEVY FSGSTTLDNG ITVAARIELE AEADNANNAD KQWVTVSGAF GKIEAGQRSG
VFDEFMVVAP TVGSVSLDDS KSWLGAGNGI NGSVTQLYLD QSLDDDDAKV TYVTPQFYGF
SAGVSYTPNV GGPRANNSSI VAPTKKNRDL VQMAVGYDAE FGDVGLKASA AAATQSNLWI
YQGGVNVSYA GFTLGGAYTE YDDQSAAAVA SWDADASEGR VWTAGLSYAV GPYSVGFTYG
QTDNDSKSGV DAAIYKIGGD YKMGPGIDLV GNVFYGETGI GSSNVDASRE GFGAVTGIVL
AF