| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2178 |
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| Symbol | |
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| ID | 3835605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 2529029 |
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| End bp | 2530714 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637826280 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_427265 |
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| Protein GI | 83593513 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATCAG TGAAATCGAC GGCGCGAACG GCCTTTCTCG CCCTGTCTTG CGCCGCCCTG
GCTGGCGGCC TGTGGGCGGC CTCCGGACCC GCGGCCCAGG CCGAGGAGGG CAAGCGCGGC
GGATCCCTGC GGCTGCTGGC CCGCGCCGGT GGCGGCACGC TTGATCCCCA TATCAATTAT
ACCGCCCAGT ATTTCCAAAC GAATTTCATT CTTTATGACG GCTTGGTCGG CTTCAAGAAG
GCCAATGGTA AGGACGGCAA CGCCATCGTC GCCGATCTGG CCGAGGCCCT GCCGACGGTC
AGCGACGACG GCAAGACCTA TACCTTCACC CTGCGCAAGG GTGTCCGCTT CTCCAATGGT
CAGCCGGTGA CCACCGGCGA TGTCGTCGCC TCGTTCCAGC GCATCTTCAA GGTGTCCAGC
CCGACCGCCG GAACCTTCTA CAACGGCATC CTCGGCGCCG ATCACTGTCT GGCCGAGCCG
GCGGGGTGCA CCCTGGCCGA GGGGGTGAGC GCCGATCCGG CCAGCGGCAC GATCGTTATC
AAGCTGGCGG CGGCCGATGC CGAGTTCCTG CAAAAGCTGT CCTTGCCCCA TGCCGCCATC
CTGCCCGCCG ACGCCCCGGC CAAGGATGTC GGCACCGATG CCATCCCCGG CACCGGGCCC
TATAAGATCG AAAGCTACGA CCCCAATACC CGCCTGCGTC TGGTGCGCAA TCCCTATTTC
AAGGAATGGA GCAAGGACGC CCAGCCCGAC GGCTATGTCG ACGAGATCAA CTATGACTTC
GGTCTGACGG AAGAGGCGGC GATCACCGCC ATCCAGAACG GTCAGGCCGA CTGGATGTTC
GATCCGCCGC CGCCCGATCG CCTGCCCGAG CTCGGCACCA AATACGCCAA GCAGGTTCAC
CTCAATCTGC TCGCGGCGAT GTGGTATGCG CCGATGAACG TCAATCTGGC ACCGTTCAAT
GACGAGCGGG TGCGCAAGGC GGTCAATTAC GCCGTCGATC GCGGCGCCCT GACCAAGCTG
TTTGGCGGGG CCAATCTGGC GACGCCGGCC TGCCAGATCC TGCCGCCCGA CTTCCCCTCC
TATGAGGCCT ATTGCCCCTA TACCCAGGCG CCCGGCGCCA AATGGTCCAA GCCCGATCTG
GAAAAGGCCA AGGCCCTGGT CAAGGACTCG GGGACGGCGG GGCAGAAGGT GACGGTGATC
GTCGAGGATA ACGCGGTGGC GCGCTCCATC GGCGTCTATC TTCAGGGCGT GCTTGCGCAG
CTTGGCTATG ACGCCTCGGT CAAGCCGATC TCGCAGAACA TCCAGTTCAC CTATATCCAG
AACACCGCCA ACGCGGTGCA GATCAGCGTC TCGCAGTGGT ATCAGGATTA CCCGGCGGCC
TCGAACTTCC TGAACGTGCT GTTTAGCTGC GGCTCCTTCC ACCCGGGCTC GGATTCCTCG
ATCAATATGT CGGGCTTCTG CGACAAGACC ATCGATGCCC AGATCACCGA GGCCCTGGTC
ACGGCGACGA AGGATCCGGC GAAGGCGGCG ACCCAATGGA CGGCCATCGA TAAGGCGATC
ACCGACAAGG CGCCGGTGGC CGTGTTGTTC ACCCCCAAGC AGGTCACCTT CCTGTCGGCG
CGGGTGAAGG GCTTCGTCTT CAATAATCAG ACGAAATGGC TGATCAGCCA GTCGTGGGTC
GAGTGA
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| Protein sequence | MRSVKSTART AFLALSCAAL AGGLWAASGP AAQAEEGKRG GSLRLLARAG GGTLDPHINY
TAQYFQTNFI LYDGLVGFKK ANGKDGNAIV ADLAEALPTV SDDGKTYTFT LRKGVRFSNG
QPVTTGDVVA SFQRIFKVSS PTAGTFYNGI LGADHCLAEP AGCTLAEGVS ADPASGTIVI
KLAAADAEFL QKLSLPHAAI LPADAPAKDV GTDAIPGTGP YKIESYDPNT RLRLVRNPYF
KEWSKDAQPD GYVDEINYDF GLTEEAAITA IQNGQADWMF DPPPPDRLPE LGTKYAKQVH
LNLLAAMWYA PMNVNLAPFN DERVRKAVNY AVDRGALTKL FGGANLATPA CQILPPDFPS
YEAYCPYTQA PGAKWSKPDL EKAKALVKDS GTAGQKVTVI VEDNAVARSI GVYLQGVLAQ
LGYDASVKPI SQNIQFTYIQ NTANAVQISV SQWYQDYPAA SNFLNVLFSC GSFHPGSDSS
INMSGFCDKT IDAQITEALV TATKDPAKAA TQWTAIDKAI TDKAPVAVLF TPKQVTFLSA
RVKGFVFNNQ TKWLISQSWV E
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