Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A2089 |
Symbol | |
ID | 3835516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 2417532 |
End bp | 2418224 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637826191 |
Product | amino acid ABC transporter permease |
Protein accession | YP_427176 |
Protein GI | 83593424 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTCGCAA CCCTCGACTT CGATGTCATC GCCCGCTCGA TCGGCTATCT GTTCTATGAC GGGATGACCT TCACCCTGGG GCTGACCTTG CTCGGCACCC TGGCCGGCGG GCTGCTTGGC ACGGCCTTGG CCATGCTGCG GCTGTCCAGC CTGCCCGTTC TTCCCCATCT GGCGACGCTC TATATCAATC TGATGCGCTC GATGCCGCTG GTTCTGTTGA TTTTCTGGGT CTACTTCATG GTCCCCTATC TGGGGCAATG GATCTTGGGA ACCGATCGGC CGATGCAGGT CGGCACCTTC ACCTCGTCGC TGCTAACCTT CACCCTGTTC GAAGCGGCCT ATTTCGCCGA GATCATGCGC TCGGGCATCC AATCGGTCTC GCGCGGGCAG ACGGCGGCGG CCCAGGCCCT TGGCCTCACC TATTTCCAGT CGATGGGCCA TGTGGTGCTG CCCCAGGCGT TCCGTGCCAT GCTGCCGGTG CTTCTGACCC AGGTGATCGT GTTATTTCAG GACACCTCGC TGGTCTATGT GCTGTCGATC ACCGATTTCC TTGGTGCGGC GAGCAAAGTG GCGCAGCGCG ATGGCCGGCT GGTCGAAATG TACCTTTTCG CCGCCGTCGT CTATTTCGCC ATCTCGTTCG CCGCCTCGCT GTTGGTCAAG CGCATTCAGG CGCGCACCGC TATCATTCGC TGA
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Protein sequence | MFATLDFDVI ARSIGYLFYD GMTFTLGLTL LGTLAGGLLG TALAMLRLSS LPVLPHLATL YINLMRSMPL VLLIFWVYFM VPYLGQWILG TDRPMQVGTF TSSLLTFTLF EAAYFAEIMR SGIQSVSRGQ TAAAQALGLT YFQSMGHVVL PQAFRAMLPV LLTQVIVLFQ DTSLVYVLSI TDFLGAASKV AQRDGRLVEM YLFAAVVYFA ISFAASLLVK RIQARTAIIR
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