| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A2084 |
|---|
| Symbol | |
|---|
| ID | 3835511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 2412159 |
|---|
| End bp | 2413343 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637826186 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_427171 |
|---|
| Protein GI | 83593419 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCGG CCAACAGCCT GTTCAGCGGC CTGGGAACGA CGATCTTTTC GGTGATGTCG
CACCTTGCCC AGGAGTATGG GGCGATCAAC CTTGGACAGG GCTTTCCCGA AGGGCTGGAG
CCGGCCGATG TGATCGCCGC CGCCGCCCGC TCGCTGGCGG CCGGCCCCCA CCAATATCCG
CCGATGATGG GGCTGCCGGC CCTGCGTCAG GCGCTCGCCG CCCATGAAAA GCGCTTTTAT
GATCTCGATA TCGACTGGCA AACCGAGGTG ATGGTGACCT CGGGGGCCAC CGAGGCCCTG
GCCGACGCCC TGTTTGGGCT GATCGAGCCC GGCGACGAGG TGGTGCTGAT CGAGCCGCTC
TATGACAGCT ATCTGCCGAT CATCCGCCGC GCCGGCGGCA TTCCCCGGCT GGTCCGCCTG
GAGCCGCCGC GCTGGTCGCT GCCGCGCGAG GCCCTGGCCG CGGCCTTTTC GCCGCGCACC
AAGCTGATCT TGGTCAATTC GCCGATGAAC CCCTGCGCCA AGGTGTTCAG CGCCGACGAG
ATGGCCTTCA TCGGCGACCT GGCCATCGCC CATGACGCCT ATATCGTTTG CGACGAGGTT
TACGAGCATC TGGTTTTCGA TGGTCAAAGC CACCGGCCCC TCATGGCCCA GCCCGGCCTG
CGCGAGCGTT GCGTGCGCAT CGGGTCGGCC GGCAAGACCT TTTCGCTGAC CAACTGGAAG
GTCGGCTATG TGATCGCCGC GCCCGAGGTG CTGGATCCGA TCGCCAAGAC CCACCAATAC
ATCACCTTTA CCACCCCCAT CCCGCTGCAG CAGGCGGTGG CCGAAGGGCT GGCCAAGGAT
GACGCCTATT TCGCCGGCCT CGCCCACGAC ATGGCGGCGC GGCGCGATCG CTTGGGCGCG
GGCTTGCGAC GGATCGGCTT CGAGGTGCTC GACTGCGCCG GCACCTATTT CCTGACCGCC
GATTTCCGCC CCCTCGGCTT TGCCGGCGAC GATTTGGCCT TCTGCCGGCA TATCACCTGC
GAGGCCGGGG TGACCGCCGT GCCGGTCAGC GCTTTTTATC AGCCCGGGCA GGGCGGAATC
CCCACCTCTT TCGCCCGGTT CTGCTTTGCC AAGCGCGACG ACGCCCTCGA CGAGGCGGTC
GCCCGCCTGG AGCGCCATTT CGCGGGCGGC CGACGAAACG CATAA
|
|---|
| Protein sequence | MKAANSLFSG LGTTIFSVMS HLAQEYGAIN LGQGFPEGLE PADVIAAAAR SLAAGPHQYP
PMMGLPALRQ ALAAHEKRFY DLDIDWQTEV MVTSGATEAL ADALFGLIEP GDEVVLIEPL
YDSYLPIIRR AGGIPRLVRL EPPRWSLPRE ALAAAFSPRT KLILVNSPMN PCAKVFSADE
MAFIGDLAIA HDAYIVCDEV YEHLVFDGQS HRPLMAQPGL RERCVRIGSA GKTFSLTNWK
VGYVIAAPEV LDPIAKTHQY ITFTTPIPLQ QAVAEGLAKD DAYFAGLAHD MAARRDRLGA
GLRRIGFEVL DCAGTYFLTA DFRPLGFAGD DLAFCRHITC EAGVTAVPVS AFYQPGQGGI
PTSFARFCFA KRDDALDEAV ARLERHFAGG RRNA
|
|---|
| |