Gene Rru_A2064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A2064 
Symbol 
ID3835490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2387340 
End bp2388608 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content72% 
IMG OID637826165 
ProductFAD dependent oxidoreductase 
Protein accessionYP_427151 
Protein GI83593399 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0107883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCGC CCGCCGATGC CGCCCCCCCT CTTCCCACCC TGGTCGTTGG CGCCGGGATC 
ATCGGCGTGT GCTGCGCCCT CGCCCTGCAA GAGCGCGGGC TGTCCGTCAC CCTGATCGAT
GCCAAGGAAC CGGGCCAAGA AGCCAGCTTC GGCAATGCCG GTTGTTTGGC GGCCAGCGAG
ATCTTGCCGA TGGCGGCGCC CGGGCTGGCC TGGAAGGTGC CGCGTTGGCT GCTCGACCCC
TTGGGCCCCC TGGCCCTGCG CCCTGGCCAT CTGCCGGCCC TGATCCCCTG GTTGCTGCGC
TTCCTGCGCG CCGGCACGCC GCAAGGGGTG ATCGCCGCCA CCGCCGCCTT GGCGCCGCTG
GCCGATCTCA GCTGGCGGCT TTGGCCCGAG CTGGCGCGCG CCCACGGCCT GGCAGGCGAT
ATCCACGCGC AAGGCACCCT GACCCTTTAT GAAACCGACG CGGCCTTCCA AGCCGATGCC
GCCGCCCGCC GGGTCCAGGC CGAGCATGGC ATCGTCAGCG AGATCCTGAC CCCGGGCGCC
CTGGCCGAGC GCGAACCCGA TCTGGCGCCG ATTTTCCGCC ACGGGGTATT CCATCCGCGC
TACGCCCATG TCTCCGACCC GGCCCATATC ACCGCCAAGC TGGCCGAACG CGCCGTGGCT
CGGGGGGCCG TGCTGGTGCG CGGCCGGGTT CTGGGCATCG AGCGCGGCGC GGGCCGCGCG
CGCCTGCGCC TTGAGGGCGG CGCCAGCCTG GAGGGCGCCC GGGTGGTGAT CGCCGCCGGA
GCATGGTCGG GGGCGCTTTG CCGGGCCCTG GGCCATCGGG TGCTGCTGGA AAGCGAGCGC
GGCTATAACA CCACCTTGCC CGATCCGGGG GTGCGCATCG GCTGCCCGAT CAGTTCGGCC
GAGGGCAAAT TCATGCTCTC GCCCTTGGAT ATCGGCCTGC GCATCGGCGG TGCGGCCGAA
TTCGCCGGAT TGACCGCCCC GGCCAATTAC CGGCGCTGCG ACGCGCTGTT GACCGTCGCC
AAGCGCTTCC TGCCCGGGCT GCGCGACGCC GGCGGCAGCC GGTGGATGGG CCAACGGCCG
TCAACGCCCG ACAGCCTGCC GGTGATCGAC GCCCTGCCCG GCGACGGCGC GGGCGTGTTG
CTGGCCTTCG GCCATGGTCA TCTTGGCCTG ACCAATGCCC CGGGCACGGC GGCGATGATC
GCCGCCCTGG CCTGTGGCGA GACGGCGCCG ATCGACGCCG GCGCCTTTTC CCTCTCCCGC
TTCGCCTAA
 
Protein sequence
MPSPADAAPP LPTLVVGAGI IGVCCALALQ ERGLSVTLID AKEPGQEASF GNAGCLAASE 
ILPMAAPGLA WKVPRWLLDP LGPLALRPGH LPALIPWLLR FLRAGTPQGV IAATAALAPL
ADLSWRLWPE LARAHGLAGD IHAQGTLTLY ETDAAFQADA AARRVQAEHG IVSEILTPGA
LAEREPDLAP IFRHGVFHPR YAHVSDPAHI TAKLAERAVA RGAVLVRGRV LGIERGAGRA
RLRLEGGASL EGARVVIAAG AWSGALCRAL GHRVLLESER GYNTTLPDPG VRIGCPISSA
EGKFMLSPLD IGLRIGGAAE FAGLTAPANY RRCDALLTVA KRFLPGLRDA GGSRWMGQRP
STPDSLPVID ALPGDGAGVL LAFGHGHLGL TNAPGTAAMI AALACGETAP IDAGAFSLSR
FA