Gene Rru_A1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1996 
SymbollipB 
ID3835421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp2306189 
End bp2306839 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID637826096 
Productlipoate-protein ligase B 
Protein accessionYP_427083 
Protein GI83593331 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0321] Lipoate-protein ligase B 
TIGRFAM ID[TIGR00214] lipoate-protein ligase B 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.895983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTGGC GTTTCGCCGA TACCCCCGTT TCCTACCCCG AAGCCCTGGC CTTCATGGAC 
GACCGCATCG CCAAGATCCG CGAGGATCGG GCCGGGGAAT GCGTCTGGCT GCTTGAACAC 
CCCCCGCTTT ATACGGCGGG GACCAGCGCC GATCCGGCCG ACCTGCTCAG CCCCGATCGC 
TTTCCGGTCT ATGCCGCCGG GCGCGGCGGC CAATACACCT ATCATGGCCC CGGCCAACGC 
GTCGGCTATG TGATGCTCGA CCTGCGTCGA CGCGGCAAGG ACGTGCGCTG CTTCGTGCAT 
AATCTGGAAG AGCTGATGAT CCGCGCCCTG GCCGAGTTCA ATATCCGGGG CGAGCGCCGC 
GAGGGCCGGG TCGGCATCTG GGTGGCGCGC GGCGGCGGAC GCGAGGACAA GATCGGCGCC 
ATCGGCGTGC GGGTCCGCCA TTGGATCACC TTCCACGGCT TCGCCCTCAA CGTCGAACCC 
GATCTGTCGC ATTTCTCGGG CATCGTGCCC TGCGGCATCA GCGACCACGG GGTGACCAGC 
CTGTGGGATC TGGGCCAGAC GGCGACACTC CAAGAGGTTG ATTCCGCTTT GATGCGCAGC 
TTTGATGCGG TATTTGGGCC CTGCCCGACG GAAAGCTTGA CCTCGACGTG A
 
Protein sequence
MEWRFADTPV SYPEALAFMD DRIAKIREDR AGECVWLLEH PPLYTAGTSA DPADLLSPDR 
FPVYAAGRGG QYTYHGPGQR VGYVMLDLRR RGKDVRCFVH NLEELMIRAL AEFNIRGERR 
EGRVGIWVAR GGGREDKIGA IGVRVRHWIT FHGFALNVEP DLSHFSGIVP CGISDHGVTS 
LWDLGQTATL QEVDSALMRS FDAVFGPCPT ESLTST