| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1939 |
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| Symbol | |
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| ID | 3835363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2246881 |
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| End bp | 2247480 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637826038 |
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| Product | ribosomal large subunit pseudouridine synthase E |
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| Protein accession | YP_427026 |
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| Protein GI | 83593274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCGGC TGATCCTTCT CAATAAGCCC TATGACGTGC TCAGTCAGTT CACTGACCGG
GCCGAGGGCC GGGCCACCCT CGCCTCGCTG GTGCCGATCC CCGGGGTTTA TGTCTGCGGG
CGCCTCGATC GCGATAGCGA AGGCTTGCTG CTGCTGACCG ACAACGGCCC CTTGCAGCAC
CACATCAGCC ATCCGCGCTC CAAGGTGCCC AAGACCTATC GGGCCCAGGT CGAAGGGGTC
GCCGACAAGG CCGCGCTTGA TCGCTTGCGC CAGGGGGTGA CGCTGCGCGA CGGCCCGGCC
CGCGCCGTGA CGGTCGAGGC GATCGACGAG CCGGCCGGGC TGTGGCCGCG CGATCCACCG
ATCCGCTGGC GGGCGAACAT CCCGACGAGT TGGATCGAGC TGACCATCGA CGAGGGCCGC
AATCGCATGG TCCGGCGGAT GACGGCGGCG GTCGGCCTGC CAACCCTGCG GCTGATCCGC
TGGTCGATCG GCGATTGGAC CTTGGAGAAC CTGCCGCCGG GAAGCTGGCG CGAGGAGACC
GCGAGCCTGC CGGCGCGTCG CCGCCCCGCC GCCAAACCGC CGCGCCCTCC CCGCCGTTAG
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| Protein sequence | MPRLILLNKP YDVLSQFTDR AEGRATLASL VPIPGVYVCG RLDRDSEGLL LLTDNGPLQH
HISHPRSKVP KTYRAQVEGV ADKAALDRLR QGVTLRDGPA RAVTVEAIDE PAGLWPRDPP
IRWRANIPTS WIELTIDEGR NRMVRRMTAA VGLPTLRLIR WSIGDWTLEN LPPGSWREET
ASLPARRRPA AKPPRPPRR
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