Gene Rru_A1905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1905 
Symbol 
ID3835329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp2207745 
End bp2209337 
Gene Length1593 bp 
Protein Length530 aa 
Translation table11 
GC content68% 
IMG OID637826004 
ProductABC transporter component 
Protein accessionYP_426992 
Protein GI83593240 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAAC GCCAGCCCAC CGTCCCCAAG GGATCGGCGC CCGATCGCAA TGCGTCCTTG 
GCGCCGCGTC TGGTGCTCAG GGGCATCGTC AAGCGCTTTC CCGGGCTGAT TGCCAATGAT
CACGTCGATC TTCGGGTGAA CGCCGGCGAG ATCCACGCCC TGCTTGGCGA GAACGGCGCG
GGGAAAAGCA CCCTCGTCAA GATCATCTAT GGCGTGCTGC AGGCCGATGA CGGCGTGATC
GAATGGGAAG GCGCCCCGGT TCGCCTATCC AGCCCGGCCC AGGCCCGGCA GCGGGGCATC
GGCATGGTCT TCCAGCATTT TTCGCTGTTT GAGTCCTTGA GCGTCGTCGA GAACATCCAA
CTCGCCATGG ACCGCGCCGT CGAGGCCGAC AGCCTGGCCA ACCGGGTGCG CGAGGTTTCC
GCCCGCTATG GTCTGGCCAT CGATCCGACG CGGACGGTCA ATGATCTTTC GGTCGGCGAG
CGCCAGCGGG TGGAAATCGT GCGCTGTCTG CTGCAGACGC CGCGATTGCT GATCATGGAC
GAGCCGACCA GCGTTCTGAC CCCCCAAGAG GCCGATACCC TGTTTGAAAC CCTGCGCCGG
CTGGCCGGCG AGGGGGTTTC GATCCTTTAT ATCTCCCATA AGCTCGACGA GATCCGCGCC
CTCTGCCAAA GCGCCACCGT GCTGCGCGCC GGCAAGGTGG TTGGCGCCTG CGATCCCCGC
GAAAAAACCT CGCGCGAGCT GGCGCAGATG ATGATCGGCG ACGAATTGGC CGCCGTCGAA
CGCCGCGTCG CCCATGGCGG CGGGGACTTG CGGCTGGTGG TCGATCGCTT GTCGATGGCC
GCCGATACGC CCTTTGGCGT CGATCTGCGC GATGTGTCGC TCAAGGTGCG GGCGGGCGAA
ATCCTGGGTA TCGCCGGCGT CGCCGGCAAC GGCCAAGGGG CGCTGGTGGC CGCCCTGTCG
GGGGAACGCC ACGCCGCGCG CGGCGACGCG GTGCGCATCG AGGGCCAGCC GGTGGGCCAT
CTGGGGCCGC GCGAGCGCCG GGCCCTGGGG CTGGCCGTGG TGCCCGAGGA ACGGCTGGGC
CGGGGCACCG TGCCCGAGCT GTCGCTGGCC GAGAACGCCT TGCTGTCGAG CTACCGCCAG
GGCGATCTGG TGCGCGGCGG GTTCGTCGAC CAGGGGCGCA CCCATGGTCT GGCCCGGCGC
ATCATCGATG TCTTCGGCGT GCGCGCCGGC GGCTCGCGGG CGGCGGCGCG CAGCCTGTCG
GGCGGCAATC TGCAGAAATT CATCATCGGT CGCGAGATCA TGCAAAAGCC CAAGCTGCTG
GTCGCCAGCC AGCCGACCTG GGGAGTCGAT GCCGGCGCCG CCGCGGCGAT CCACCGGGCC
TTGCTTGATC TGCGCGACCA GGGCGCGGGA ATTCTTATCA TCAGCCAGGA TCTCGACGAG
CTTTTCGCCA TTTCCGATCG TATCGCCGTG ATGTGCGGCG GCAAGCTGTC GGAGGCCCGC
CCCTCGCATG AGGCGACGCT GGAACAGGTC GGCCTGATGA TGGGCGGCTT GTTCGATCTC
CAGGGCGACG CGGTGGCGGA GACGGTGCGA TGA
 
Protein sequence
MEERQPTVPK GSAPDRNASL APRLVLRGIV KRFPGLIAND HVDLRVNAGE IHALLGENGA 
GKSTLVKIIY GVLQADDGVI EWEGAPVRLS SPAQARQRGI GMVFQHFSLF ESLSVVENIQ
LAMDRAVEAD SLANRVREVS ARYGLAIDPT RTVNDLSVGE RQRVEIVRCL LQTPRLLIMD
EPTSVLTPQE ADTLFETLRR LAGEGVSILY ISHKLDEIRA LCQSATVLRA GKVVGACDPR
EKTSRELAQM MIGDELAAVE RRVAHGGGDL RLVVDRLSMA ADTPFGVDLR DVSLKVRAGE
ILGIAGVAGN GQGALVAALS GERHAARGDA VRIEGQPVGH LGPRERRALG LAVVPEERLG
RGTVPELSLA ENALLSSYRQ GDLVRGGFVD QGRTHGLARR IIDVFGVRAG GSRAAARSLS
GGNLQKFIIG REIMQKPKLL VASQPTWGVD AGAAAAIHRA LLDLRDQGAG ILIISQDLDE
LFAISDRIAV MCGGKLSEAR PSHEATLEQV GLMMGGLFDL QGDAVAETVR