Gene Rru_A1901 details

Gene Information

• Locus tag: Rru_A1901
• ID: 3835325
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 2202238
• End bp: 2204298
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637826000
• Product: chemotaxis sensory transducer
• Protein accession: YP_426988
• Protein GI: 83593236
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGTGG TTAACAAGGC AAGCAAGGTC CGGCGAAAGC CCTTCGGGCG GCTTGTGACA 
CTTGTACGGG ACATGTCGAT CAGCCGAAAG ATCGGCCTTG GTTTCGGGGT CATCGTTATT 
CTTTTGATGG TGCTTGGCGC CGGGGGAACC TGGGGGCTTT TTGACGCTAA GACCAAGGTT 
GTGCAAATCC AGGCGATCAA TCAGGCCCAA ACGCAGGTGG CCGAGGCCTA TACCACCTTG 
CTCAAGGTCG ATGCGGCGCT TGCCGACTTC CTGATCTCCA ACGAAGCCAC CGCCGCCGAT 
TCCGCCGTTG GCGCCCTGGG CGGCGCCTTG AACGCCCTGA ACGAAGCCGG CGCCATTCTG 
ACGGGCGAGG ATAAGGAGCG GATCGCCGAG CTGATCGCTC AGATCGATAC CCTCTCAACC 
CGCATCCGCC GCGTTATCGA CCTGCAAAGC GCCGCCGAAG TGGCCTTTTC CAGTGTCTCC 
AATCAGGGAC TGTCCCTCGA GCAGCGAATT TCCACCTTGT CGAGCGACGC CTTCGGCACC 
GGGTCGCTCA ACGCCATCTT CAAGGCCGAG GAAGCCCTGG TGAAGCTGGT CGCGGCGCGC 
ACCGCCGCCC AGGCGTTTTT CGTTCGCCCC AAGGCCGTCC CCTTCGATCC CATCATCAAG 
GACCTTGATG CCGCCGCCGC CCATGTGACC AGCCTCAAGC GCAGCATGGA CGATCCGACC 
GTTCTAGAAC GGATCACCGA GGCCGAGGCC CTTTTCGTCA CCTTTCGCGC CGACCTGTTG 
AGCGCCCGCG AAGCCGTCAC GGCCCGGGTG AGCGCCATCG AAAAGGACCT GGTCCCGGTT 
CAACGCAAGG TTGTTCAGGG GATGCGCAAG GTTGAGCGCA CCACCGAAAA GCTTCAAGCC 
GAGATGTCGG CCGATATCGA CCAGGGTCTG CAGCGCAACA TCGTGTTGTC GGTCGCCGTC 
TCCGGCGGGG TGATCTTGTT CGCCATCGTC CTGTCGCTGG GCCTGGGGCG CTCGATTGGC 
CGGCCGATCG GTCGGCTGAT CGCCAGTCTC GAGCGCCTGG AGCGCCGCGA TCTCGACGCG 
CCGGTGACCG ATACCGACCG CCGCGACGAG GTTGGCCGGC TGGCCGGCGC CCTGGAAAGC 
TTCCGGGGCA ATATGCGCAT CGCCGACGCC CTTGAGCGCG ACAAGGAAGA ACAGGCCCGC 
CAGCTGGCCA TTCATGCCAG CCGCCTGGAG GATCTCAATC GCGGCTTCGA AGGCGACTCG 
CGGGCCCTGC TCGACGAGAC CCTGGCCCAG GTCGCCCGGT TGCGCGCCAT CGCCGATGAT 
ATGGCGACCC TGTCCCATCA GACCGACGCC GGGGCCGGCG ACGCCTCGGA AGCGGCCGAA 
CAGGCCAGCC GCGATACGGA TTCGGTGGCG ACCGCCGCCG AGGAACTGGC CGCCTCGGTG 
CTCGAGATCA GCCGTCAGGT CCAGCATTCC TCGGACGTGG CGACCTCGGC CTCGCAGATG 
GCCCAAGGCG CGGTCAGCAC CGTTGACGGT CTGTTGCTCG ACGCCAATCG CATCGGCGAG 
GTGGTCGAAC TGATCACCGC CATCGCCAGC CAGACCAATC TTCTGGCGCT CAACGCCACG 
ATCGAAGCCG CAAGGGCTGG CGATGCCGGC AAGGGCTTCG CCGTCGTCGC CGGCGAGGTC 
AAGACCCTGG CCAATCAGAC CAGCAAGGCG ACCGAGGAAA TCGGCTTGCG GGTCACCGCC 
GTCCAGGCCA AGACCGGCGA GACGGTGGCC GCCATCGCCG CCATCGCCGA CGCCATCGCC 
GATGTCATGC AGACCGCCGC GGCGATCGCC GCCGCCGTCG AGGAGCAGGG CTCGGCGACC 
CACGAGATCG CCCGCAATAT CCAGGCGGTT TCCGGGGGAG CGCAAACGGC GGCGAGCAGC 
GCCCAAGCGG TGCGCTCGGT CGCCGCCACC GCCCAGGAAA AGGCCGGCGG CGTGGTCGAA 
GCCGTCGGCA GGCTCGCCCA GCAATCACAG ACCCTGGGCG ACACCATCGG CCGCTTTCTT 
GACGAGGTGC GCACCGCCTG A 

 

Protein sequence

MGVVNKASKV RRKPFGRLVT LVRDMSISRK IGLGFGVIVI LLMVLGAGGT WGLFDAKTKV 
VQIQAINQAQ TQVAEAYTTL LKVDAALADF LISNEATAAD SAVGALGGAL NALNEAGAIL 
TGEDKERIAE LIAQIDTLST RIRRVIDLQS AAEVAFSSVS NQGLSLEQRI STLSSDAFGT 
GSLNAIFKAE EALVKLVAAR TAAQAFFVRP KAVPFDPIIK DLDAAAAHVT SLKRSMDDPT 
VLERITEAEA LFVTFRADLL SAREAVTARV SAIEKDLVPV QRKVVQGMRK VERTTEKLQA 
EMSADIDQGL QRNIVLSVAV SGGVILFAIV LSLGLGRSIG RPIGRLIASL ERLERRDLDA 
PVTDTDRRDE VGRLAGALES FRGNMRIADA LERDKEEQAR QLAIHASRLE DLNRGFEGDS 
RALLDETLAQ VARLRAIADD MATLSHQTDA GAGDASEAAE QASRDTDSVA TAAEELAASV 
LEISRQVQHS SDVATSASQM AQGAVSTVDG LLLDANRIGE VVELITAIAS QTNLLALNAT 
IEAARAGDAG KGFAVVAGEV KTLANQTSKA TEEIGLRVTA VQAKTGETVA AIAAIADAIA 
DVMQTAAAIA AAVEEQGSAT HEIARNIQAV SGGAQTAASS AQAVRSVAAT AQEKAGGVVE 
AVGRLAQQSQ TLGDTIGRFL DEVRTA