| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1866 |
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| Symbol | |
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| ID | 3835290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 2162763 |
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| End bp | 2164757 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637825965 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_426953 |
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| Protein GI | 83593201 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGTTTGC TTTCCATCGT GCTCGTCTGC TTGATCATTC TGCCCCTCGC CGCCCGGGCC
GCCCCGCTGT CGGTCAGCGA TGAGGCGACC TATGCCGGCG CCTTTCGCGC CGCGGATCTC
GGGCAATGGC CCCAGGCGAT GGCCCTGGCG CGCAGCGCGT CGGATCAGAC GCTGCGCGAT
GTCGTGCTCT GGCGCCAATT GCGCGCCGCC GGCCGCGACA ACGCCGGCCT TGAGGACCGC
ATGGCTTTCG TCCTCGGCCA TCCCGACTGG CCCTTGCTGT CAACCATCCA GCGCCTAGCC
GAAGACGACA TGCTGTCGCT GCCGCGCGCG CCCTCGCAGG TCATCGGCTT TCTCGAACGC
CGCAAGCCGG TCTCCCCCGG CGGCGAGATC GCCCTGGCCC GGGCCTATCT GGCCTCGGGC
GCCCGCGACA AGGCGGCGCG GCTGATCCGC TCGGCCTGGG TCGCGGGGGA TTTCACCGCC
AGCCAGGAAA AGGACCTGCT CGGCACCTAT GGCGACCTGC TGCGCACCGA CGACCATTGG
GCGCGCGCCG ACAGGGTGAT GTGGGACAAC CGCATCGACG CGGCCCGGCG CATGGTGCCG
CGGCTGGACA AGGCGCGCGC CGCGGTGATC ACCGCCCGGG TGACCCTGGC CGAGGGCAAG
ATCGACCCCA ACGCCGCGGT CAACGCCGTG CCCAAGGCCC TGCAAAATGA TCCGGGTCTG
GTTTTCGAAC GCGCCCGCTG GCGACGGCTG GCCGGGCTTG ACGACGCGGC GATCGAGTTG
ATGCTCCACC GGCCCTCGGC CGAGGGCCGG GCCGACCGCT GGTGGCAGGA ACGCGCCGTT
CTGCTGCGCG AGGCCTTGGA TCGCGGCCTG ATCACCAAGG CCTATCGTCT GGCCGCCACC
CACGAAAACG ACCGGGGCGC CGCCTTCGCC GAGGGGGAAT GGTTGGCCGG CTGGATCGCC
TTGCGCTTCC TTCACGACGC GCCCCAGGCC TTCAAGCACT TCAAAACCCT GTATGAAGGG
GTCTCGACGC CGATCAGCCT GTCGCGCGGC GCCTATTGGG CCGGGCGGGC GGCCGAGGCG
ATGAAGCGGC CCGACGAGGC GCGCCAGTGG TACCAGAAGG CCAGCGCCTT TCCCGCCACC
TTTTATGGTC AATTGGCCGC CGAGCGCACC GGCGCTCCGC TCTCGAAACT GTTGCCCAAG
GCCGATGCGG CGGCGAGCGA CGCCGAACGC AAGGCCCTAG CCAATGATCG GCTGGTCGTC
ATCGCCAGCC AACTGGCCCA AATCGGCCGA ATCGATGAAT TGCTGTCTTT CACCCTGGCT
TTGAACACCA AGCACAAGGG GGACGGCGCC CGGGCGATGA TCGCCGGCAT CGCCCTGAAG
GCCGGCTATC CCGGCGTCGG CGTCTTCGTG TCGCGCCGCG CCGCCCAGGA TGGCACCTAT
CTGGTCGAGG CCGGCTATCC GCTGCCCAAG GCCCTAGCCC CTTCGATCAG CGAGCACGCC
CGCCGCCAGG GCGTCGATCC GGCGGCGCTT CTCGGGCTGA TCCGCCAGGA AAGCAATTTC
GACCGCGCGG CGCGCTCGGC GGTGGGCGCC TTGGGGCTGA TGCAGCTTAT GCCGGGCACG
GCGCGCACGG TTTCAGGCCA GGAGGGGCTG GCCTTCGATC AGGCGCTGCT GACCCGCGAT
CCCCTCTACA ACGTGCGGCT GGGAGCGCGC TATTTCGGCG ATCTGCTCAA GCGCTTTGAT
GGATCGGTGG TGCTGGCGGC GGCGGCCTAT AACGCCGGCC CGGGGCGGCC GACCGAATGG
ATCGCCCGCA ATGGCGATCC GCGCGCCATG GATCTGGCCG ACGCCATCGA CTGGATCGAG
ATGATCCCCT ATCGCGAAAC CCGCAATTAC GTTCAGCGGG TGATCGAAGG CATGCTGGTT
TATCAGGTGC GCCTTGGTCA GACCCTGCCG GCCAAGGCGC CGGCTCAGGC CCTGGGCATC
GCCGGGCGCT CGTAA
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| Protein sequence | MRLLSIVLVC LIILPLAARA APLSVSDEAT YAGAFRAADL GQWPQAMALA RSASDQTLRD
VVLWRQLRAA GRDNAGLEDR MAFVLGHPDW PLLSTIQRLA EDDMLSLPRA PSQVIGFLER
RKPVSPGGEI ALARAYLASG ARDKAARLIR SAWVAGDFTA SQEKDLLGTY GDLLRTDDHW
ARADRVMWDN RIDAARRMVP RLDKARAAVI TARVTLAEGK IDPNAAVNAV PKALQNDPGL
VFERARWRRL AGLDDAAIEL MLHRPSAEGR ADRWWQERAV LLREALDRGL ITKAYRLAAT
HENDRGAAFA EGEWLAGWIA LRFLHDAPQA FKHFKTLYEG VSTPISLSRG AYWAGRAAEA
MKRPDEARQW YQKASAFPAT FYGQLAAERT GAPLSKLLPK ADAAASDAER KALANDRLVV
IASQLAQIGR IDELLSFTLA LNTKHKGDGA RAMIAGIALK AGYPGVGVFV SRRAAQDGTY
LVEAGYPLPK ALAPSISEHA RRQGVDPAAL LGLIRQESNF DRAARSAVGA LGLMQLMPGT
ARTVSGQEGL AFDQALLTRD PLYNVRLGAR YFGDLLKRFD GSVVLAAAAY NAGPGRPTEW
IARNGDPRAM DLADAIDWIE MIPYRETRNY VQRVIEGMLV YQVRLGQTLP AKAPAQALGI
AGRS
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