Gene Rru_A1786 details

Gene Information

• Locus tag: Rru_A1786
• ID: 3835208
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: -
• Start bp: 2076676
• End bp: 2078553
• Gene Length: 1878 bp
• Protein Length: 625 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637825883
• Product: dihydroxyacid dehydratase
• Protein accession: YP_426873
• Protein GI: 83593121
• COG category: [E] Amino acid transport and metabolism; [G] Carbohydrate transport and metabolism
• COG ID: [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase
• TIGRFAM ID: [TIGR00110] dihydroxy-acid dehydratase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATCAAGA CAGGCTCAAG GCAAATGACC CCATACCGTT CCCGCACATC AACCCACGGG 
CGCACGATGG CCGGTGCCCG TGGCCTTTGG CGCGCCACTG GCATGAAGGA CGAGGATTTC 
GGCAAGCCGA TCATCGCCAT CGCCAATTCC TTCACCCAAT TCGTGCCCGG CCATGTCCAC 
CTGAAGGACA TGGGCCAATT GGTGGCCGCC GAGATTGCCG CCGCCGGTGG CGTGGCCAAG 
GAATTCAACA CCATCGCCGT CGATGACGGC ATCGCCATGG GCCATGACGG CATGCTCTAT 
AGCCTGCCGT CGCGCGAACT GATCGCCGAT GCGGTCGAAT ACATGGTCAA CGCCCATTGC 
GCCGACGCCC TGGTGTGCAT TTCCAATTGC GACAAGATCA CCCCGGGCAT GCTGATGGCG 
GCGATGCGCC TGAACATCCC GACCATCTTC GTCTCCGGCG GGCCGATGGA AGCGGGCAAG 
GTGGTGTTGG GCGGCACGGA ACGCAGCGTC GATCTGATCG ACGCCATGGT GGTCGCCGGC 
GATGCCAAGG TTTCGGATGC CGATGTCGAG ACCATCGAGC GCTCGGCCTG TCCGACCTGC 
GGCTCGTGTT CGGGAATGTT CACCGCCAAT TCGATGAACT GCCTGACCGA GGCCCTGGGG 
CTGTCGCTGC CGGGCAATGG CAGCGCCCTG GCCACCCATG TGGCGCGGCG CGGGCTGTTC 
GAGGAGGCCG GACGGCGCAT CGTCGATCTG GCCAAGCGAC GCTATGAGCA CGACGACGAA 
AGCACCCTGC CGCGCGCCAT CGCCTCGTTC AAGGCCTTTG AAAACGCCAT GAGCGTCGAT 
ATCGCCATGG GCGGGTCGAC CAATACGGTG CTCCACCTGC TCGCCGCCGC CCAGGAGGGC 
GAGGTGCCCT TCACCATGGC CGATATCGAC CGGCTGTCGC GGCGCATTCC CCATCTGTGC 
AAGGTTTCGC CAAGCACGGC CGACTTCTAT ATGGAGGATG TTCACCGCGC CGGCGGCGTC 
ATGGGCATCA TGGGCGAGTT GTCGCGGGCC GGCCTGCTCC ATGAGGACCT GCCGACGGTG 
CATACGCCGA CGCTGAAGGC GGCGCTTGAT CACTGGGATA TCCGGCGGCC GGTCGACGAC 
GCGGTGCGCG CCTTCTTTCG GGCGGCGCCC GGCGGCGTGC GCACCGTCGT GCCGTTTTCC 
ACCGACCGCC TGTGGGACAG CCTGGACGAT GACCGCGAGA CCGGCTGCAT CCGCGATCTC 
GACCACGCCT ATTCCCGCGA TGGCGGGCTG GCCGTGCTCT ATGGCAATCT GGCGCCCAAC 
GGCTGCATCG TGAAAACCGC CGGAGTCGAC GCCTCGATCC TCACCTTCAC AGGCACCGTC 
CGCCTCTGCG AAAGCCAGGA CGAGGCGGTG GCGCGTATTC TCGGCGGCGA AATTCAGGCC 
GGCGACGTCG TGCTGGTGCG CTATGAGGGT CCCAAGGGCG GCCCGGGCAT GCAGGAAATG 
CTTTATCCCA CCAGCTATCT GAAGTCGCGC GGCCTGGGCA AGGTCTGCGC CCTGGTCACC 
GATGGCCGTT TCTCGGGCGG CAGCTCGGGC CTGTCGATCG GCCATGTCTC GCCGGAAGCC 
GCCGCTGGCG GGCCGATCGG TCTGGTCGAG GAGGGGGATA TCATCGTCAT CGATATCCCG 
GCGCGCAGCA TTGTCGTCGA CCTGTCCGAC GAGGAGCTGG CGGCGCGGCG AAGCGCCATG 
GAGGCGCGGG GACGCGCGGG ATGGAAGCCG GCCAAACCGC GCAAGCGGGC GGTCTCTCCG 
GCCCTGCGCG CCTATGCGGC CCTGACCACC AGCGCCGATC GCGGCGCCGT CCGCGACGTG 
TCGCAGGTCG AGCGCTAA 

 

Protein sequence

MIKTGSRQMT PYRSRTSTHG RTMAGARGLW RATGMKDEDF GKPIIAIANS FTQFVPGHVH 
LKDMGQLVAA EIAAAGGVAK EFNTIAVDDG IAMGHDGMLY SLPSRELIAD AVEYMVNAHC 
ADALVCISNC DKITPGMLMA AMRLNIPTIF VSGGPMEAGK VVLGGTERSV DLIDAMVVAG 
DAKVSDADVE TIERSACPTC GSCSGMFTAN SMNCLTEALG LSLPGNGSAL ATHVARRGLF 
EEAGRRIVDL AKRRYEHDDE STLPRAIASF KAFENAMSVD IAMGGSTNTV LHLLAAAQEG 
EVPFTMADID RLSRRIPHLC KVSPSTADFY MEDVHRAGGV MGIMGELSRA GLLHEDLPTV 
HTPTLKAALD HWDIRRPVDD AVRAFFRAAP GGVRTVVPFS TDRLWDSLDD DRETGCIRDL 
DHAYSRDGGL AVLYGNLAPN GCIVKTAGVD ASILTFTGTV RLCESQDEAV ARILGGEIQA 
GDVVLVRYEG PKGGPGMQEM LYPTSYLKSR GLGKVCALVT DGRFSGGSSG LSIGHVSPEA 
AAGGPIGLVE EGDIIVIDIP ARSIVVDLSD EELAARRSAM EARGRAGWKP AKPRKRAVSP 
ALRAYAALTT SADRGAVRDV SQVER