Gene Rru_A1754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1754 
Symbol 
ID3835176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand- 
Start bp2048198 
End bp2048848 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID637825851 
Producthypothetical protein 
Protein accessionYP_426841 
Protein GI83593089 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGTC TTCTATCCGT TGTTCTGTTT TTGATCCTGT GTGGCACGCT TCCGGCCCGC 
GCCCATCCCC ATGTGTCGAT CGACGCCCGC GTCGCCCTGG GGGTCGACGG CGAGGGACGG 
CTGGAAACCG TCGCCCTCAC CTGGATCTTT GACGAGATCT ATTCCGCCTA TAGCGTCGAG 
GGTTATAAGC GCGACAAGGC CGGCCACCCC GATCCGGCGG CGCTGGAGGC GATGATCGCC 
CAGGCAATGA TTGATCTGCG CGACTGGGAC TATTTCACCG AACTGAAAAT CGGCGGCCAG 
CGCCAGACCT GGGGCGAGGT GCGCGCCCAT GAGGCGAAGT GGGAGGCGGG GCGCCTGATC 
TATCGCTTCA CCCTGGCCCT GGCGGCGCCA ACCTCCTTGC GGGCGGTCGC CCCCACCCTG 
TCGCTTCGGG TTTATGATCC AAGCTATTAC ATCGCCATCT TGCTCGAGGA CAAACCGGGC 
GCCGCCCAGA TCACCCCGGC CCTGCCGCCC TGCGTCGTGC ACATCCGCCC GCCGATGGGC 
CTGCGCGAGG CGATGATCGA TGACGCCGTC GCCCTGGCCG AGACCATCGA ACCGGGCCAG 
GAAGGCCTGG GCGCCCCCTT CGCCGAAACC ATCGGCGTCG TCTGCCAATG A
 
Protein sequence
MVRLLSVVLF LILCGTLPAR AHPHVSIDAR VALGVDGEGR LETVALTWIF DEIYSAYSVE 
GYKRDKAGHP DPAALEAMIA QAMIDLRDWD YFTELKIGGQ RQTWGEVRAH EAKWEAGRLI 
YRFTLALAAP TSLRAVAPTL SLRVYDPSYY IAILLEDKPG AAQITPALPP CVVHIRPPMG 
LREAMIDDAV ALAETIEPGQ EGLGAPFAET IGVVCQ