Gene Rru_A1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1556 
Symbol 
ID3834973 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp1836556 
End bp1837113 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID637825648 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_426643 
Protein GI83592891 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.632474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAGTGA GCACGCCCGT GATCGTTCCG CGGGGCGGGG CGCCGGTGCC GCCGGGCCCC 
GATCAGGATC TGATCCTTGG TCAGGTCGCC CGCGAGATCG AGGAAAAGGG CTTCGTTCTG 
TCCAATGTCG ACAGTCTGGT CAACTGGGCG CGCGCCGGAT CGCTATGGCC GATGACCTTC 
GGGCTCGCCT GCTGCGCCCT GGAAATGATC CATTGCGCCT GCGCCCGCTA TGATCTTGAC 
CGCTTCGGCA CGGTTTTCCG GCCCAGTCCG CGCCAGTCCG ACGTGATGAT TGTCGCCGGC 
ACCCTGACGA ACAAGATGGC CCCGGCGCTG CGCAAGGTTT ACGACCAGAT GGCGGAGCCG 
CGCTGGGTGA TCTCGATGGG CAGTTGCGCC AATGGCGGCG GCTATTATCA CTACTCCTAT 
TCGGTGGTGC GCGGCTGCGA CCGCATCGTG CCGGTCGACA TCTATGTGCC GGGCTGCCCG 
CCGACCTCGG AGGCCCTGCT GTACGGGGTG TTGCAGCTGC AAAAGAAGAT CAAGCGGACC 
GGCGCGCTTT ACCGGTGA
 
Protein sequence
MGVSTPVIVP RGGAPVPPGP DQDLILGQVA REIEEKGFVL SNVDSLVNWA RAGSLWPMTF 
GLACCALEMI HCACARYDLD RFGTVFRPSP RQSDVMIVAG TLTNKMAPAL RKVYDQMAEP 
RWVISMGSCA NGGGYYHYSY SVVRGCDRIV PVDIYVPGCP PTSEALLYGV LQLQKKIKRT 
GALYR