Gene Rru_A1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1454 
Symbol 
ID3834869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1717957 
End bp1718493 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID637825544 
ProductPhage tail Collar 
Protein accessionYP_426542 
Protein GI83592790 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.809591 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCGATG CCTACTTGGG GGAAATCCGC CTGTTTGCCG GCAATTGGGT ACCCCAGCAA 
TTTGTCGCCT GCGATGGATC CCTCTTGCCG ATCAAGCAGA ACGAGGCGCT TTTCGCCGTG
CTGGGCACGG TGTTTGGCGG CGATAGCGTC GCCACCTTCG GCGTTCCCGA TCTGCGTGGC
CGGGTGCCCC TGCACAAGGG CCAGGGGACC GGATTGACCC CGCGGGTTCT GGGGCAGGCG
GTGGGGACCG AGACGGTGAC GGTGGCCGCC GCCGAAATGC CCGCCCATAA CCACACCCTG
TTCGCTTGTT CCGATCCGGC AACCGCGAAC AGCCCGATCA ACGCCCTGCC CGCGACCGCC
CCGGCGGGCT ATACCCAGTT CGTCACCAAT CAACCAGGGC AGACTCTGAC CAAGCTGCAA
TTGGCCGAAG CCGCGATCTC CACCGAGGGA GGCGGCCTCG CCCACGCCAA TGTCATGCCC
TCCCTGGCCC TGACTTTCAT CTTGTGTTCC CAGGGAATTT TCCCCGTCAA GCAGTGA
 
Protein sequence
MVDAYLGEIR LFAGNWVPQQ FVACDGSLLP IKQNEALFAV LGTVFGGDSV ATFGVPDLRG 
RVPLHKGQGT GLTPRVLGQA VGTETVTVAA AEMPAHNHTL FACSDPATAN SPINALPATA
PAGYTQFVTN QPGQTLTKLQ LAEAAISTEG GGLAHANVMP SLALTFILCS QGIFPVKQ