| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1386 |
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| Symbol | |
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| ID | 3834801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1636167 |
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| End bp | 1638200 |
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| Gene Length | 2034 bp |
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| Protein Length | 677 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637825476 |
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| Product | DEAD/DEAH box helicase |
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| Protein accession | YP_426474 |
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| Protein GI | 83592722 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTTTT TCCCCGCGGG TCATCCGCTG ACCCAAGCCT TGATCGAGCG TAACTACACC
GAACCCACCG CCGTGCAGAC GGCGGTTCTC GAACCCGGGG CCCAGGGTCG CGACCTGCTG
GTGTCGGCCC AGACCGGATC GGGCAAGACC GTGGCCTATG GTCTGGCGAT CGCCAGCACC
CTGCTTGGCG ACGAGGCTGT GCTGGAGCCG GCGACCGAGC CGCTGGCCCT GATCGTCGCC
CCCACCCGCG AGCTGGCCTT GCAGGTCCAT CGCGAGCTGG CGTGGCTTTA TGGCCATGCC
GGGGCCAAGG TGGTGTCGTG CGTGGGCGGC ATGGATCCCC GCGCCGAAAC CCGGCGTCTG
GGCGAGGGCT GTCATATCGT CGTCGGTACT CCCGGGCGTT TGCGCGACCA CCTGGAGCGC
GGCAACCTCG CCGTCGGCCG GCTGAAGGCG GTGGTGCTCG ACGAAGCCGA CGAGATGCTT
GATCTGGGGT TCCGCGAGGA TCTGGAATTC CTTCTGGAGG CGACGCCCCA GGAGCGCCGC
ACCCTGTTGT TCTCGGCCAC CTTGCCCAAG GCCATCGTCA CCCTGGCCAA GCGCTATCAG
CGCGAGGCCT GGCGTATCGC CGTGGCGGCG GGCAAGCAGG GCCATGCCGA TATCGAATAC
CGCGCGATCA GCGTCGCTCC CAACGAGGTC GAGCACGCGG TGGTCAATCT GCTGCGCTAT
GTCGAATCGC CCGCCACCTT GGTGTTCTGC AACACCCGCG AGTCGGTGCG CCACCTGCAG
GCCATTTTGC TCGAACGCGG TTTCGCCGCC GTCGCCCTGT CGGGCGAACT GGGTCAGGGC
GAGCGCAATC AGGCCCTTCA GGCCCTGCGT GACGGTCGCG CCCGGGTCTG CGTCGCCACC
GACGTGGCGG CGCGCGGCAT CGATCTGCCC AATATCGGGC TGGTCATCCA TGCCGAGCTG
CCCCAGAACG CCCAAACCCT GCAGCACCGC AGCGGCCGCA CCGGCCGCGC CGGACGCAAG
GGGATCAGCG TGCTTTTGGT GCTGTTCTCG CGCAAGCGCC GCGCTGAACA GCTTTTGGAA
ACCGCCGGCG TGCGCGCCCA ATGGGGCGGC GCCCCCTCGG CCGACGATAT CCGGGCGCTT
GATCAGGAAC GCCTGCTGCA AAGCCCGCTG GTCAGCGAGG ATCTGACCGA GGACGATCTG
GCGATGGCCA AGGCCCTTTT GGCGGTGCGC TCGCCCGAGG AGATCGCCGC CGCCCTGGTG
CGCATGTACC GCGCCCAGTT GCCCGCCGCC GAGGATGTGT TCGCCGCCGG AACCGCCGAG
CCTTCGCCCG AGCCGCGCGC TCGGCGTCCG GCGTCGCGCG ATCGTGACCG CGATGGCGAG
CGCGAGCCGA TGACCGAGCC GCGCCCGGGA CGGAACTCGG GGCTGTCGGG CCCCAGCGTC
TGCTTCCGCT TGAATGTCGG GCGGCAGAAG AACGCCGATC CGCGCTGGCT GGTGCCGATG
ATCTGCCGCC TGGGTAAGAT CACCAAGCAG GAGATCGGCG CGATCAGCAT CTTCGAACGC
GACACCAAGA TCGAAATCGC CGCTGCCTTC GCCGAACGCT TCATCGCCGC CGTCGGTCAG
GTCGAGCGCG GCGATATCCG CATCGATCCC TGGGTCGAGA CCAGCCGTAG CAAGCCGGTC
GACGCCCTGG AGGTGGCCAC GGCCGGCGAC GAGGCGGCCG CTGCGGCGCC CCGCGCCAGC
GCGCCCCGCG CGCCCCGCGC CAGTGAACCC CGGGTGACGA AGCCCTATGA GCCGCGCGCC
CCGCGATCGA CCGAACCGCG CGCGCCGCGT GCCGCCCGCA GCGCCGATCG CCCGACCGAG
GCCCGCGCCC CGCGCACGGC GGAGCCCCGC CCGCCGCGGG CGAGCGACCG CGCCAGCGAA
CCGCGCGCCG CCAAGGCGCC GCGCCGCACG GAAAAGCCGG CTGTTGGCAA GGCGATGGTC
AAGACTTGGG GCAAGCCCAA GCCGGGCAGC CGTCCCAAGA CCAAGCAGAA ATAA
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| Protein sequence | MDFFPAGHPL TQALIERNYT EPTAVQTAVL EPGAQGRDLL VSAQTGSGKT VAYGLAIAST
LLGDEAVLEP ATEPLALIVA PTRELALQVH RELAWLYGHA GAKVVSCVGG MDPRAETRRL
GEGCHIVVGT PGRLRDHLER GNLAVGRLKA VVLDEADEML DLGFREDLEF LLEATPQERR
TLLFSATLPK AIVTLAKRYQ REAWRIAVAA GKQGHADIEY RAISVAPNEV EHAVVNLLRY
VESPATLVFC NTRESVRHLQ AILLERGFAA VALSGELGQG ERNQALQALR DGRARVCVAT
DVAARGIDLP NIGLVIHAEL PQNAQTLQHR SGRTGRAGRK GISVLLVLFS RKRRAEQLLE
TAGVRAQWGG APSADDIRAL DQERLLQSPL VSEDLTEDDL AMAKALLAVR SPEEIAAALV
RMYRAQLPAA EDVFAAGTAE PSPEPRARRP ASRDRDRDGE REPMTEPRPG RNSGLSGPSV
CFRLNVGRQK NADPRWLVPM ICRLGKITKQ EIGAISIFER DTKIEIAAAF AERFIAAVGQ
VERGDIRIDP WVETSRSKPV DALEVATAGD EAAAAAPRAS APRAPRASEP RVTKPYEPRA
PRSTEPRAPR AARSADRPTE ARAPRTAEPR PPRASDRASE PRAAKAPRRT EKPAVGKAMV
KTWGKPKPGS RPKTKQK
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