Gene Rru_A1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1295 
Symbol 
ID3833603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1529210 
End bp1530088 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content63% 
IMG OID637825385 
Productextracellular solute-binding protein 
Protein accessionYP_426383 
Protein GI83592631 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.914061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCTTC AAGAAAAACC GGAGATTTCA GAGATGGCGA TGATGACGAC CAAGGCGAGC 
TGGAAGGCGA TGGTGGCCGG AGCGGCCGCG CTGATGACGA TGGTGGCCGC GAGCCTGCCG
GCGAACGCCG ATACCCTGGA GGATATCAAG AAGGCCGGGG TGATCAAGGC CGCCACCGAG
ATGCAGTTCC CGCCCTTCGA TTTCCTTGAG GGCGACAAAT ACGTCGGCGT CGATCGCGAT
CTGATGGACG AGGTGGCCAA GGAACTGGGC GTGAAGGTCG AATACATCGA TCTGCCGTGG
ACCAGCGTTC TGCCCGGGCT GGAAGCGGGC AAGTTCGATC TGGTGATCGC CCCGGTGACC
ATCACCAAGG AACGTCTGGC CCGCTACGCC TTCACCCTGC CGATCTCGGA AGGCACGGCG
GCGCTGATGA AGCGCGCCGA TGATGACTCG ATCACCAAGC CCGAGGACAT CGCCGGCAAA
ACCATCGGCG GCGGCAAGGG CACCTCGCAG CTTGGCCAGA TCAAGGAATA CGCCGCCGCT
TTGCCCGGCA AGGTCGAGTT CAAGGAATAC GTCGACAGCA ACCAGTCTTA TGCCGATCTC
GCCGCCGGCC GGGTCGACGC TTCGGTCAAT TCCTATCCCA ATCTCGCCTA TGCCGCCGCG
CAGCGCCCCG AAACCTTCGC CGTCGTCCTG CCGCCGTTCG GCAAGACCAC CTATTTCTCG
TGGGTCTCGC GCCTGGGCGA AAAGGACGCC TCGCTGGTCG AAGCGGTGAA CGCCGCCCTG
CTCAAGCTTG GCGAGGACGG CCGGATGTCG GCCATCCATG AAAAGTGGTT CGGCAAGGGC
GTCGATCTGC CCAAGACCAT TCCCGAGCCC TCCTTCTAG
 
Protein sequence
MALQEKPEIS EMAMMTTKAS WKAMVAGAAA LMTMVAASLP ANADTLEDIK KAGVIKAATE 
MQFPPFDFLE GDKYVGVDRD LMDEVAKELG VKVEYIDLPW TSVLPGLEAG KFDLVIAPVT
ITKERLARYA FTLPISEGTA ALMKRADDDS ITKPEDIAGK TIGGGKGTSQ LGQIKEYAAA
LPGKVEFKEY VDSNQSYADL AAGRVDASVN SYPNLAYAAA QRPETFAVVL PPFGKTTYFS
WVSRLGEKDA SLVEAVNAAL LKLGEDGRMS AIHEKWFGKG VDLPKTIPEP SF