Gene Rru_A1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A1280 
Symbol 
ID3833588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp1508300 
End bp1509271 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content64% 
IMG OID637825370 
ProductHpr(Ser) kinase/phosphatase 
Protein accessionYP_426368 
Protein GI83592616 
COG category[T] Signal transduction mechanisms 
COG ID[COG1493] Serine kinase of the HPr protein, regulates carbohydrate metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAA TGCCTGTCCA GCCCACTCCC GCTCCGCCCG TCGATGCGCC TTCACCTGAC 
GGTGACCGCG ACCTGTTCGG CTGGCGTGTG CGAGCGGACC TGCCTCTGCC GGAATTGCCG
GTCTGGGCGG GCGATGGACG CGCCCCCGAT ATTCTGATCC GCGTTGCCGC TGTCTCCCCC
CTGGACGACG GGGCGCAGGT GTTCAGCCCC CGGATCCGTT TCATAGAAGC CACCCTCTGC
TTCGATGTCC CCGACGTGGC CCGCTACCGG GTCGATGGCG GACATCTTGT CACCATCGAA
GCCGCTCGCG GTATCGCGGC CGACGCCCCG GAGATCCGAT TGTTTTTCTT CGGTACGGTG
TTGGCCGTGC TTTGTTTCCG GCGTGGGCTG ATCCCTTTGC ATGCCAGTGC GGTGGCGCTT
GACGGGCGCG CGCTGCTGCT GTCGGGGGAA TCCGGGACGG GGAAATCCAC CCTGGCCGCC
GCCCTGCTGG CGCGCGGTTA CCCGCTGCTG TCCGATGATC TGTGCGCCCT GGACGTCTCT
TGTCCGGATA AGCCGATGAT TTTACCCTGT ACCGCCCATC TGAAGCTCTG GGGAGACGCC
GCCGCGCGGC TGGGCATCGC CACAGACGGT ATGACACCCG TTCGCCGGCA TCTCGATAAG
TTCAGAATAC CCGTGCGATC GGCGAGCGAC GCCCCCTTGG GGCCAGGGAC CATCATCAGG
CTGAAACGGG TTACCCGGGC GGAACAGGTT GGAACCCGAC CTCTGCTGGG GGCGGAGGCT
CTGTGTTACG ATCTGATCCA TCGTTTCCGC CTTGGCATAG CGCTCGGATA TCAAAGCACC
ATGCTCACGG CCTTGGCCCC CCTGGTCAGA TCTGCTCCGA TTATCCAGTT GAACCGGCGT
GACGATTTGG GAGCATTACC CGATTTGGCC GATCACGTTA TCAGACTGGC GCGCGACGAG
CGGAGGGACT GA
 
Protein sequence
MNEMPVQPTP APPVDAPSPD GDRDLFGWRV RADLPLPELP VWAGDGRAPD ILIRVAAVSP 
LDDGAQVFSP RIRFIEATLC FDVPDVARYR VDGGHLVTIE AARGIAADAP EIRLFFFGTV
LAVLCFRRGL IPLHASAVAL DGRALLLSGE SGTGKSTLAA ALLARGYPLL SDDLCALDVS
CPDKPMILPC TAHLKLWGDA AARLGIATDG MTPVRRHLDK FRIPVRSASD APLGPGTIIR
LKRVTRAEQV GTRPLLGAEA LCYDLIHRFR LGIALGYQST MLTALAPLVR SAPIIQLNRR
DDLGALPDLA DHVIRLARDE RRD