| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1266 |
|---|
| Symbol | |
|---|
| ID | 3833574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1487176 |
|---|
| End bp | 1487979 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637825356 |
|---|
| Product | photosystem I assembly BtpA |
|---|
| Protein accession | YP_426354 |
|---|
| Protein GI | 83592602 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0434] Predicted TIM-barrel enzyme |
|---|
| TIGRFAM ID | [TIGR00259] membrane complex biogenesis protein, BtpA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTTTTG ATTTCCTCGG TCCCCGTAAA AAAGCGGTTA TCGCCATGGC CCATATCGGC
GCCTTGCCCG GCACGCCGCT TTATGACGCC GATGGCGGCA TGATGAAGCT GATCGACGAT
GTGGTCGGCG ATATCGAGAA GCTCCAGAAG GGCGGCGTTC ACGCCATCAT GTTCGGCAAC
GAGAATGATC GGCCCTATCA GTTCGAGGCG CCGATCGCCA GCGTCGCGGC GATGACCGCG
ATCATCAGCG CGGTGCGGCC GATGCTCAGC GTGCCCTTTG GCGTCAACTA CCTGTGGGAT
CCGGCGGCTT CGGTCGCCAT CGCGGTTGCC ACCGGCGCCT CCTTCGCCCG CGAGATCTTC
ACTGGGGTTT TCGCCTCCGA CATGGGCGTG TGGTCGCCCA ATGCCGCCGA GGCCCTGCGC
CTGCGCCGCA ATCTGCACCG CCCCGATCTG AAGCTGTTGT TCAACATCAA TGCCGAATTC
GCCTCCTCGC TTGATAGCCG GAGCATCGGC TTGCGGGCGC GCAGCGCCAT CTTCTCGTCG
CTGGCCGATG CCATCTTGGT CTCGGGTCCG CTGACCGGTC AGCCGGCCCA GGCCTCGGAT
CTGCGCGAGG TCCGCGAGGC GATTGGTACC GAGGTGCCGC TGTTTGCCAA TACGGGCGTG
CGTTTGGAGA ACGTCGACGA TGTGCTGTCG ATCGCCGATG GCTGCGTGAT CGGCACCCAT
TTCAAGGTTG ACGGCTCGAC CTGGAATCGG GTGGACGGGG GGCGCGTCTC GCGCTTCATG
GACAAGGTCG CGACCCTGGT CTGA
|
|---|
| Protein sequence | MIFDFLGPRK KAVIAMAHIG ALPGTPLYDA DGGMMKLIDD VVGDIEKLQK GGVHAIMFGN
ENDRPYQFEA PIASVAAMTA IISAVRPMLS VPFGVNYLWD PAASVAIAVA TGASFAREIF
TGVFASDMGV WSPNAAEALR LRRNLHRPDL KLLFNINAEF ASSLDSRSIG LRARSAIFSS
LADAILVSGP LTGQPAQASD LREVREAIGT EVPLFANTGV RLENVDDVLS IADGCVIGTH
FKVDGSTWNR VDGGRVSRFM DKVATLV
|
|---|
| |