| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1219 |
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| Symbol | |
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| ID | 3833717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 1438898 |
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| End bp | 1439908 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637825308 |
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| Product | sigma54 specific transcriptional regulator |
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| Protein accession | YP_426307 |
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| Protein GI | 83592555 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02974] psp operon transcriptional activator PspF |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACGC TCCCTCCGAT TATCGGCGAA GATCCGGCCT TTCTTGATGT CATCGAGCAG
GCCTCGCGGC TGGCGCCCAT CGACCGCCCC TGTCTGGTGG TTGGTGAACG CGGCACCGGC
AAGGAACTGG TGGCGGCGCG GCTGCACTAT CTGTCGCGGC GCTGGCAGGG GCCGTTGGTC
AAGGTCAATT GCGCGGCGCT GTCGGACACC CTGCTTGAAA GCGAGTTGTT CGGCCATGAG
GCGGGCGCCT TCACCGGGGC CCAGCGCCGC CATTTGGGCC GCTTCGAGCG CGCCGAGGGC
GGCACCCTGA TTTTGGATGA AATCGCCAAT GCCTCGCAGG CCGTTCAGGA AAAGGTGCTG
CGGGTGATCG AATACGGCGA GTTGGAGCGG GTGGGCGGCG CGGCGACGCT GCGCGTCGAT
GTGCGGGTGA TCGGCGTCGC CAATGTCGAT TTGCCAAAGC GCGCCGCCGA AGGGGGCTTC
CGGGCCGATC TTCTGGACCG GCTGGCCTTC GATGTGCTGA CCCTGCCGCC CTTGCGCGCC
CGCCCGGGCG ATATCCTCGC CCTGGCCGAG GCCTTCGCCC GCGCCATGGC CGGCGACTTG
GAGCGTCCGG CCCCGGCCTT CTCGCCCGCC GCCCGCGCCC AGCTTCTTGG GCATGGCTGG
CCGGGTAATG TCCGCGAATT GCGCAATGCT AGCGAGCGCA CCGTCGCCCG TTTGCCGCGC
GAGGCCACGG TGATCGAGAC GGTGGTGATC GATCCCTTCG CTAGCCCCTG GTGTTTGGCG
GCCGCCCCCG CTGCGCCGCC GGCGATCCTT TCGCCGGCGG ACGGCGCTTT GCCGCCCGAG
GGCCAACCCT TCGCCGCCGC CGTCGCCGCC TATGAGCAGG GGTTGCTACG CCGGGCCCTG
GCGGCGGCCG AGGGCAATCA AGGCAAGGCC GCCCAAGCGC TGGGCCTGGG CTATCACCAG
TTCCGCCGCC TGCTCGCCCG CCATGGCCTG GGTCCGGGGG CGGAGCGGTA A
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| Protein sequence | MDTLPPIIGE DPAFLDVIEQ ASRLAPIDRP CLVVGERGTG KELVAARLHY LSRRWQGPLV
KVNCAALSDT LLESELFGHE AGAFTGAQRR HLGRFERAEG GTLILDEIAN ASQAVQEKVL
RVIEYGELER VGGAATLRVD VRVIGVANVD LPKRAAEGGF RADLLDRLAF DVLTLPPLRA
RPGDILALAE AFARAMAGDL ERPAPAFSPA ARAQLLGHGW PGNVRELRNA SERTVARLPR
EATVIETVVI DPFASPWCLA AAPAAPPAIL SPADGALPPE GQPFAAAVAA YEQGLLRRAL
AAAEGNQGKA AQALGLGYHQ FRRLLARHGL GPGAER
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