10 homologs were found in PanDaTox collection
for query gene Rru_A1149 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A1149  hypothetical protein  100 
 
 
447 aa  901    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0538158  n/a   
 
 
-
 
NC_012034  Athe_0138  protein of unknown function DUF324  23.01 
 
 
474 aa  72  0.00000000002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0184  hypothetical protein  27.29 
 
 
548 aa  64.7  0.000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_2526  hypothetical protein  22.27 
 
 
504 aa  60.8  0.00000005  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1677  CRISPR-associated RAMP protein  23.26 
 
 
450 aa  54.3  0.000004  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.71005  n/a   
 
 
-
 
NC_010320  Teth514_1834  hypothetical protein  23.31 
 
 
472 aa  48.1  0.0003  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_2051  CRISPR-associated Csm3 family protein  21.65 
 
 
260 aa  47.8  0.0004  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_1007  hypothetical protein  27.96 
 
 
558 aa  47.8  0.0005  Salinispora tropica CNB-440  Bacteria  normal  0.517138  normal 
 
 
-
 
NC_009921  Franean1_1376  hypothetical protein  30.72 
 
 
576 aa  45.8  0.002  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_20530  uncharacterized RAMP superfamily protein probably involved in DNA repair  23.83 
 
 
415 aa  44.7  0.004  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal  0.587198 
 
 
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