| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A1067 |
|---|
| Symbol | |
|---|
| ID | 3833528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 1257313 |
|---|
| End bp | 1258014 |
|---|
| Gene Length | 702 bp |
|---|
| Protein Length | 233 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637825156 |
|---|
| Product | cobalamin synthesis protein/P47K |
|---|
| Protein accession | YP_426155 |
|---|
| Protein GI | 83592403 |
|---|
| COG category | [K] Transcription
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0378] Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.303636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGG TCATCTGCGC CGGGCCGGCG ACCACCGGCA AGACGGCGGT GCTCCGTCAT
GCCATCGGCA AGCTGATCGG TCGGGGGTTC AAGCCGGCCT TTCTCAAGAT CGATGTGCAA
TACGCCGAGG AGGACGAACA GTTCGCCCGC GAATTCGCCA TCCCCACCCG CAAGACCTAT
TCGGGCGATC TGTGCCCCGA CCATTGCACG GTGATGGTGC TAGGCGAGGC CCTGGAGTGG
GCGGGGCGTC AGGGAGCCGA CGTTCTGCTG GTCGAGACCG CCGGGTTATG CCTGCGCTGC
TCGCCCTATG TCGATGGCGG CCTTGGCGTC ATCGTGCTCG AAGCGACCAG CGGCATGAAC
CTGCCGCTCA AGGTCGGGCC GATGCTGTCG CTGGCCGATG TCGCCGTCGT CACCAAGATC
GACCGCATTT CCCAGGCCGA ACGCGAGGTG TTCCGCGCCC GCATTCAGGA TGTGGCGCCG
GGGGTGCGCA TCCGCGAGGC CAATGCCCTT CATGGCATCG GCATCGATCC TTTGGTCGAT
CAGATCCAGG CGACGCCCGA TGTCGACGCC ACCTTGTCCC TGCGCGGCAA TCCGCCCGTG
GGCACCTGCA CGATCTGCGT CGGCAAGAAG GAGATCGGCT GGAAGGCCCA TTTCGGCGTG
GTGCGCTCGC TGGAGAACCA GACTTTCTAT CGGGGGGAAT GA
|
|---|
| Protein sequence | MKLVICAGPA TTGKTAVLRH AIGKLIGRGF KPAFLKIDVQ YAEEDEQFAR EFAIPTRKTY
SGDLCPDHCT VMVLGEALEW AGRQGADVLL VETAGLCLRC SPYVDGGLGV IVLEATSGMN
LPLKVGPMLS LADVAVVTKI DRISQAEREV FRARIQDVAP GVRIREANAL HGIGIDPLVD
QIQATPDVDA TLSLRGNPPV GTCTICVGKK EIGWKAHFGV VRSLENQTFY RGE
|
|---|
| |