Gene Rru_A0789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0789 
Symbol 
ID3834095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp942133 
End bp942810 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content67% 
IMG OID637824880 
Productbinding-protein dependent transport system inner membrane protein 
Protein accessionYP_425880 
Protein GI83592128 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCAC ACCTGATCCA GTCACTGCTT GAGTCACTGT CCGAGACGCT GATCATGGTC 
GGGGCCTCAA GCCTGCTGGC CACGGTGTTC GGCGTGCCCT TGGGGGTTTT GCTGCTGGTT
ACCGGCAAGG GGCAGATCCT GGAACGGCCG CTGTTTAACA AGGTCGCCGG CGCCATCGTC
AACGCCACCC GCTCGACCCC CTTCATCATC TTGATGGTGG CGATCATCCC GCTGACCCGG
CTGATCGTTG GCACCTCGAT CGGCACGGCG GCGGCCACAG TGCCGCTGGT CATCGCCGCC
GTGCCCTTCG TCGCCCGTTT GGTGGAAGCC TCGCTGCGCG AGGTCGATAC CGGTCTGGTC
GAAGCCGCCC AGGCGATGGG GGCCTCGCCC GGCCAGATCA TCACCAAGGT GATGTTGCCC
GAGGCCATGC CCGGGATCAC CGCCGGGTTG ACGATCACCG TGGTCAGCCT GATCGGCTAT
TCGGCGATGG CCGGGGCGGT TGGCGGCGGC GGCCTGGGCG ATCTGGGCAT CCGCTATGGC
TATCAGCGCT TCCAGGCCGA GGTGATGGTC GCCGTGGTCG TGGTGCTGAT CGCCCTGGTC
ACGGTCGTTC AGGCCGCCGG CGACCGCTTG GCCACTCGCC TCAACAAGCG GGTGGTCCGC
CAAGGTCCGC GTCTTTAG
 
Protein sequence
MSPHLIQSLL ESLSETLIMV GASSLLATVF GVPLGVLLLV TGKGQILERP LFNKVAGAIV 
NATRSTPFII LMVAIIPLTR LIVGTSIGTA AATVPLVIAA VPFVARLVEA SLREVDTGLV
EAAQAMGASP GQIITKVMLP EAMPGITAGL TITVVSLIGY SAMAGAVGGG GLGDLGIRYG
YQRFQAEVMV AVVVVLIALV TVVQAAGDRL ATRLNKRVVR QGPRL