Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0757 |
Symbol | |
ID | 3834166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | + |
Start bp | 889755 |
End bp | 890321 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637824842 |
Product | isochorismatase hydrolase |
Protein accession | YP_425848 |
Protein GI | 83592096 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000750492 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCTT CCGATACCGC CCTGCTGGTG ATCGACGCCC AGGAGTCCTT TCGCCACCGC CCCACTTGGC ACGAGGGCGA CGTCGCGCCC TTCGTTGATC GGCTTCAGGC GCTGATCGAT GGGGCGCGAC GCCGGGACAT TCCCGTCGTT CAGATTTTCC ATATCGACGA CGAGGGGCCC TTCAGCCAAG CCTCGGGCCA TGTGGTGACC CTGGCGCCGC TGACCCTCGC CCCCGACGCG GTCTTTCGCA AGCGCCGCCA CAGCGCCTTG ATCGGCAGCG GGCTTGACGT CTGGCTGATC AGCAAGGGCG TTCGTCGGAT CATCGTCGCC GGCATTCGCA CCGAGCAGTG CTGCGAGACG ACGACCCGTC ACGCCTCGGA CCTTGGCTAT GACGTTGATT TCGTCAGCGA GGCGACCTTG ACCTTCGCCA TGACCGATGC CCAGGGCCGG GTATGGAGCG CCGAGGAGAT CAAGGCCCGC ACCGAGCTGG TTCTGGCCGA CCGCTTCGCC CGCATCGCCA CCGTCGAGGC GGCTTTGGCC GGTCCCCTGG TCCCCGCCGC CCGATGA
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Protein sequence | MSASDTALLV IDAQESFRHR PTWHEGDVAP FVDRLQALID GARRRDIPVV QIFHIDDEGP FSQASGHVVT LAPLTLAPDA VFRKRRHSAL IGSGLDVWLI SKGVRRIIVA GIRTEQCCET TTRHASDLGY DVDFVSEATL TFAMTDAQGR VWSAEEIKAR TELVLADRFA RIATVEAALA GPLVPAAR
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