Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rru_A0735 |
Symbol | |
ID | 3834717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodospirillum rubrum ATCC 11170 |
Kingdom | Bacteria |
Replicon accession | NC_007643 |
Strand | - |
Start bp | 861532 |
End bp | 862269 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637824820 |
Product | sugar fermentation stimulation protein |
Protein accession | YP_425826 |
Protein GI | 83592074 |
COG category | [R] General function prediction only |
COG ID | [COG1489] DNA-binding protein, stimulates sugar fermentation |
TIGRFAM ID | [TIGR00230] sugar fermentation stimulation protein |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.348218 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTTTC CCACGCCGCT GGTCGAAGGC CGGCTGGTCA AGCGCTACAT GCGGTTCCTG GCCGATGTGA TCTTGGACGA TGGCACCGCC GTGACCGCCC ATTGCGCCAA TTCGGGATCG ATGGCCTCGG TCAAGGAGCC GGGATCGCCG GTCTGGCTTT CCGAAAGCCC CAATCCCGAC CGCAAGCTGA AATACACCTG GGAGATCATC CGCGTTGGCG ACGCCTATTC CGGCGTCAAC ACCGGCACGC CCAATGCCGT GGTCGCCGAG GCCATCGCCG AGGGCAAGAT CCCGCCGCTT GCCGGCTATG CCCGCCTGCG CCGCGAGGTC AAATACGGCA AGACCTCGCG CATCGACATC CTGCTCGAGG ATGATGCCGC CGCCGACGAC GCCCCCGCCC GCCCGCGCTG CTATGTCGAG GTCAAGAACG TCACCCTCAA GCGCGATCCG GCCTGGGATG GCCCCATCGA TTTTCCCGAC GCGGTGACGA CGCGCGGCGC CAAGCACCTT CTCGAACTGG CCGATATGGT CGACCAGGGC CACCGCGCCG CCATGGTCTA TCTGGTCCAG CGCACCGATG GCGGCGCCGT CGCCATGGCC GCCGACATCG ATCCCGCCTA TGCCGCCGGC CTGAAGACCG CCATCGCCAA GGGCGTCGAG GTCTATTGCC TGGGCTGCGA GGTCGACCCC TTGCGCGGCA TCTGGGTCAA CCGCGCCCTG CCGCTGATCG CCCCTTAA
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Protein sequence | MLFPTPLVEG RLVKRYMRFL ADVILDDGTA VTAHCANSGS MASVKEPGSP VWLSESPNPD RKLKYTWEII RVGDAYSGVN TGTPNAVVAE AIAEGKIPPL AGYARLRREV KYGKTSRIDI LLEDDAAADD APARPRCYVE VKNVTLKRDP AWDGPIDFPD AVTTRGAKHL LELADMVDQG HRAAMVYLVQ RTDGGAVAMA ADIDPAYAAG LKTAIAKGVE VYCLGCEVDP LRGIWVNRAL PLIAP
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