Gene Rru_A0701 details

Gene Information

• Locus tag: Rru_A0701
• Symbol: rpsD
• ID: 3833938
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodospirillum rubrum ATCC 11170
• Kingdom: Bacteria
• Replicon accession: NC_007643
• Strand: +
• Start bp: 830110
• End bp: 830724
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637824786
• Product: 30S ribosomal protein S4
• Protein accession: YP_425792
• Protein GI: 83592040
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAAGC GCCTTAATTC GAAGCATAAA ATTGACCGCC GCTTGGGTGT AAACCTTTGG 
GGTCGCCCCA AGAGCCCGAT CAACAAGCGT GAATACGGTC CCGGCGAACA CGGCCAGCGT 
CGCCGCAAGC CGAGCGACTT CGGCATTCAG CTGATGGCCA AGCAGAAGCT CAAGGGCTAC 
TACGGCAATA TCAGCGAGAA GGCCTTCCGC AAGTACTACG AGGAAGCCTC CAGCCGTCGT 
GGCGACACCT CCGAGAACCT GATCTCCATC CTTGAGACCC GCCTCGACGC CGTGGTCTAT 
CGTATGAAGA TCGTGCCGAC CGTGTTCTCC AGCCGTCAGA TCATCAACCA CGGCCATATC 
CTGGTGAACG GTCGCCGCGT TTCGGTGGCC TCCTACCGGG TGCAGGAAGG CGACGTGATC 
GAGGTCAAGG AAAAGTCCCG GCAGATGCCC CTCATCCTCG AGGCCCTGCA GTCCCACGAG 
CGCGACATTC CCGAATACAT CACCATGGAT CTGGCGCACG CCAAGGGAAC CTTCCTGCGC 
GCTCCCAAGC TGGAAGACGT GCCCTATCCG GTGCAGATGG AACCGAACCT GGTGGTCGAG 
TTCTACTCCC GCTAA 

 

Protein sequence

MGKRLNSKHK IDRRLGVNLW GRPKSPINKR EYGPGEHGQR RRKPSDFGIQ LMAKQKLKGY 
YGNISEKAFR KYYEEASSRR GDTSENLISI LETRLDAVVY RMKIVPTVFS SRQIINHGHI 
LVNGRRVSVA SYRVQEGDVI EVKEKSRQMP LILEALQSHE RDIPEYITMD LAHAKGTFLR 
APKLEDVPYP VQMEPNLVVE FYSR