Gene Rru_A0608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0608 
Symbol 
ID3833981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand+ 
Start bp720126 
End bp721106 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content66% 
IMG OID637824692 
ProductTRAP transporter solute receptor TAXI family protein 
Protein accessionYP_425699 
Protein GI83591947 
COG category[R] General function prediction only 
COG ID[COG2358] TRAP-type uncharacterized transport system, periplasmic component 
TIGRFAM ID[TIGR02122] TRAP transporter solute receptor, TAXI family 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.516133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTCG CGTTCGCTGT GCTCTTCGCC CTGACGGTGG CGGCGATGCC TGCGGGATTT 
GGCGGAGGGG CGGCGCTGGC GGCCGATCCG CGGATTGTCA CCATCGGTAC GGGCGGGGTC 
ACCGGCGTTT ATTACCCGGC CGGCGGCGCC ATCTGTCGCA TGGTCAACAA GCATCGGGCC 
GAGCATGGCA TCCGCTGTGC GGTGGAAGCG ACCGATGGCT CGGTCGAAAA CCTCGAATCC 
TTGCGCGCCG GCGACCTTGA TCTGGGGATC GCCCAGGCGG ACTGGGTTCA TCACGCCTGG 
GAAGGCGGTG CCAAGTACCA GAACCGGGCG GCGTTTGCCG GTCTGCGCAC CCTGCTTGAA 
CTCCATGCCG AATCCTTCAC CGTGGTCGCG CGCAAGGCGA CGGGCATTCG CACCTTCGAC 
GATCTCAAGG GGCGTCGGGT CAGCCTGGGG ATCACCGGAT CGGGACAGCG GGCGACGGCC 
GAGGTGTTGC TGGCGGCGAT GGACTGGACC TTGAAGGATT TTTCCGCCGT TCCCGAGGTC 
AAGCCGGCCG AGCAATCGGC GGCGCTCTGC GATGACCGGG TCGATGCCAT CATCTATGTG 
GTCGGCCATC CCAATGGGGC GATCATCGAG GCAACCACCT CGTGCGATGC CGGCTTCGTC 
GCCGTCGACA ACGCCGGGAC CGCCAGCCTG ATCGCCGAGA ACCCCTTCTA TGCCAAGACC 
GTCATCCCGG CCAAGCTGTA CCGGGGAAAC CCCGCCGATA CGCCGACCTT CGGCGTCCAT 
GCCACCTTGG TCGCCACCGC CGCCTTGCCC GATGACGTGG CCTATGCCCT GGTCAAGGCG 
GTGATGGAGA ACTTCGACGA TTTCCGCAAG CTCCATCCCG CCTTCGCCGG GCTGGTCCGC 
GAGTCCATGG TGCCCGCTCA GTCCACGGTG CCTGTGCACC CGGGGGCTTT ACGCTATTTC 
CAGGAAATCG GCTTACGGTA A
 
Protein sequence
MRFAFAVLFA LTVAAMPAGF GGGAALAADP RIVTIGTGGV TGVYYPAGGA ICRMVNKHRA 
EHGIRCAVEA TDGSVENLES LRAGDLDLGI AQADWVHHAW EGGAKYQNRA AFAGLRTLLE 
LHAESFTVVA RKATGIRTFD DLKGRRVSLG ITGSGQRATA EVLLAAMDWT LKDFSAVPEV 
KPAEQSAALC DDRVDAIIYV VGHPNGAIIE ATTSCDAGFV AVDNAGTASL IAENPFYAKT 
VIPAKLYRGN PADTPTFGVH ATLVATAALP DDVAYALVKA VMENFDDFRK LHPAFAGLVR 
ESMVPAQSTV PVHPGALRYF QEIGLR