| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0494 |
|---|
| Symbol | |
|---|
| ID | 3834023 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | + |
|---|
| Start bp | 580336 |
|---|
| End bp | 581364 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637824579 |
|---|
| Product | phytoene synthase |
|---|
| Protein accession | YP_425586 |
|---|
| Protein GI | 83591834 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1562] Phytoene/squalene synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCTGGCGG CGAGCGCCGA CGACTATGAG TATTGTCGCA AGCTTATCCG CACCGGCTCG
CGGACGTTTC ACGCCGCCTC GCTGCTGTTG CCGGCGAAAT TGCGCGATCC GGCCTATGCG
CTTTACGCCT TTTGTCGGGT CTCCGACGAC GCGGTGGACG CTCCCGATGC CCATCGCAAC
GCCATCGCCG TTCTGACCGA CCGCCTGGAC CGCGCCTATG CCGGCCGGCC CTTGCCGCTG
CCTTGCGATC GCGCCTTCGC CGATACGGTG TCGCGGTTTT CGATTCCCCG CGCCCTGCCC
GAAGCCCTGC TTGAAGGGAT GGAATGGGAT CTGGAAGGGC GGCAATGCCC AAGCCTGTCG
GATCTGCAGG CCTATTCGGC CCGGGTGGCC GGCACGGTCG GCGCCATGAT GACGGTGCTG
ATGGGCGTGC GCGAGCCGGC GGTTCTGGCC CGCGCCTGCG ATCTGGGCGT GGCCATGCAG
TTCACCAACA TCGCCCGCGA CGTCGGCGAG GACGCCCGCA ACGGCCGGCT TTATCTGCCC
CACGACTGGC TGCGCGAGGC CGGCATCGAT CCGGCGATCT GGTTGGCCGA TCCGCGTTTC
ACCCCGGAAC TGGCCGGGGT AGTGCGTCGC CTGCTCGACG AGGCCGATCA GTTGTATCGG
CGGGCGATCA CCGGCATCAG CGGCCTGCCG GCAAGCTGTC GGCCGGCGAT CCGCGCCGCG
TGCGATCTGT ATGCCGAGAT CGGCCGCGAG GTTGAACGCG CCAAATTCGA CTCGATCTCG
CGCCGCGCCG TCGTCCCCCC GGTGCGCAAG GTCAGGGTGG TCGGCCGCTC GCTGGGTGGA
ACCTTGCTGG GGCGGACCCT TGATTACGCC CCGCCCTTGG ACGAAACCCG GTTCCTGGTC
GAAGCCTCGC TCCGCCAATG GGCCCCGGCC CGAAGCTCGC CGCTGGTTCC CTGGTGGCAC
TTCGGCGAAC GCTGGACCTG GGTGATCGAT CTTTTGATCG CCCTTGAAAG TCGTCATCAG
CGTTTGTGA
|
|---|
| Protein sequence | MLAASADDYE YCRKLIRTGS RTFHAASLLL PAKLRDPAYA LYAFCRVSDD AVDAPDAHRN
AIAVLTDRLD RAYAGRPLPL PCDRAFADTV SRFSIPRALP EALLEGMEWD LEGRQCPSLS
DLQAYSARVA GTVGAMMTVL MGVREPAVLA RACDLGVAMQ FTNIARDVGE DARNGRLYLP
HDWLREAGID PAIWLADPRF TPELAGVVRR LLDEADQLYR RAITGISGLP ASCRPAIRAA
CDLYAEIGRE VERAKFDSIS RRAVVPPVRK VRVVGRSLGG TLLGRTLDYA PPLDETRFLV
EASLRQWAPA RSSPLVPWWH FGERWTWVID LLIALESRHQ RL
|
|---|
| |