| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0405 |
|---|
| Symbol | |
|---|
| ID | 3833816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 482271 |
|---|
| End bp | 482981 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637824489 |
|---|
| Product | colicin V production protein |
|---|
| Protein accession | YP_425497 |
|---|
| Protein GI | 83591745 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1286] Uncharacterized membrane protein, required for colicin V production |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGTT GGCCGATCAA TCCGTTGGAC ATCCTCGTCC TTGCCGTTCT GCTGATTTCC
GCCGCCCTCG CCTTCTTCCG TGGCTTCGTC CACGAGACCC TGGCGGTGGG CGCCTGGGCC
GGGGCGATCG TGTCGGCGGT TTATGGCATG CCGCTGGTCT CGCCGTTGTT TCTTGATCTG
ATGCCGCGCT TCCCCTGGGC GGCCGACATC GCCGCCGCCG CCACTATTTT CCTGGTGATG
CTGCTTGGGC TGTCGATCCT GACCACCATG GTGGCCAAGC AGGTGCAAAA AAGCGCGCTC
AACACCCTGG ACCGCTCCTT GGGCTTCCTG TTTGGGCTGC TGCGCGGCGG CGTGCTGCTG
ATCGCCGGCT ATGTGGCGGT GTCCTGGCTG CTGCCCGTCG ACCGCCAGCC CGATTGGATG
CGCACGGCGC GCAGCATGCC GATGATCGAG AACGGGGCGA GTTCGGCCCT GGCGCTGCTG
CCGGCCAATC TTCAGGCCCG CGAGCGCGCC TTGCGCAGCG ATACCGCCAC CGTCAAACAA
GACGCCGAAA CCCTGCTCGA CACCGGCCGC AGCGTCCGGG ACGCCCAGCG CAGTTTCGAC
CGGCTGAACA GTCCGCGGCC CGAGGCGCCG CGCGCTCCCA CCGACTCGCC AACCGGCTAT
GATTCGGGCG AGCGGCAGGA AATGAACCGC CTCTTCGAGA GCACCCAGTA A
|
|---|
| Protein sequence | MSGWPINPLD ILVLAVLLIS AALAFFRGFV HETLAVGAWA GAIVSAVYGM PLVSPLFLDL
MPRFPWAADI AAAATIFLVM LLGLSILTTM VAKQVQKSAL NTLDRSLGFL FGLLRGGVLL
IAGYVAVSWL LPVDRQPDWM RTARSMPMIE NGASSALALL PANLQARERA LRSDTATVKQ
DAETLLDTGR SVRDAQRSFD RLNSPRPEAP RAPTDSPTGY DSGERQEMNR LFESTQ
|
|---|
| |