Gene Rru_A0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0360 
SymbolmtnA 
ID3834647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp434241 
End bp435413 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content70% 
IMG OID637824443 
Productmethylthioribose-1-phosphate isomerase 
Protein accessionYP_425452 
Protein GI83591700 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0182] Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID[TIGR00512] S-methyl-5-thioribose-1-phosphate isomerase
[TIGR00524] eIF-2B alpha/beta/delta-related uncharacterized proteins 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCA AAGGCACTCC TACCCGTACG ATCTGGCCGG CCCGCGAAGG CGGGGCGGTG 
TGGATCATCG ATCAAACCCG GCTTCCCCAC GAGTTCGTCA CCCAGCGCCT GAACGACCTG
GGCGCCGTGG CCCATGCCAT CCGCGCCATG CTGGTGCGCG GCGCCCCGCT GATCGGGGCG
ACCGCTGCCT ATGGCGTGGC CTTAGGCATG GCCGAGGACC CGAGCGACGA GGGGTTGACC
CGGGCTTGTC AAACCCTGCT CGCCACCCGG CCGACGGCGG TCAATCTGCG CTGGGCGATC
GAGGCGATGG CCGAGTCTCT GGCGGCCGTG CCCCCCGACC AGCGGGCGCA AGCGGCCTGG
GCCAAGGCCG GGGCGATCTG TGACGAGGAC GTGGCGCTGA ACGAGGCCAT CGGCGACCAT
GGCCTGGGGA TCATTAAGGA TCTGGCCCGG ACCAAGGGCG TGGAAAAGGG CGGCGAGGGC
CCGATCAATA TCCTGACCCA TTGCAACGCC GGCTGGCTAG CCACCGTCGA TTGGGGCACG
GCCCTGGCGC CGCTGTACAA GGCCCATGAC GCCGGCCTCC CCATCCATGT CTGGGTCGAC
GAGACGCGGC CGCGCAATCA GGGCGCCAGC CTGACCGCCT GGGAACTCAA CAGCCACGGC
GTGCCCCATA CGGTGATCGC CGATAACACC GGCGGCCATC TGATGCAGCA CGGGCTGGTC
GATATGGTCA TCGTCGGCAC CGACCGCACC ACGGCGACGG GCGATGTCTG CAACAAGATC
GGCACCTATC TGAAGGCGCT GGCCGCTTTC GACAACGCCG TGCCCTTCTA TGTGGCGCTG
CCCGGGCCGA CCATCGACTG GACGGTGAAC GACGGCCTGC GCGAGATCCC GATCGAGCAG
CGCGACGCCG CCGAGGTCAC CCGGGTTTGG GGGCGGACCG CCGCTGGCGC CCTGGAATGG
GTGACCATCA CCCCCACCGG CTCGCCCGCC GCCAATTACG CCTTCGATGT CACCCCGGCC
CGTCTGATCA CCGGCTTGAT CACCGAACGC GGCGTTTGCG CCGCTTCGGC CGCCGGCTTG
GCCGGACTGT ATCCCGAGCG GGCGCCCGCC CCGGTTCCGG CCGGCTCCGC CGCGGGCAAA
GGTGCGGCGG CGACCGCCGA CGGGGCGCTC TGA
 
Protein sequence
MNVKGTPTRT IWPAREGGAV WIIDQTRLPH EFVTQRLNDL GAVAHAIRAM LVRGAPLIGA 
TAAYGVALGM AEDPSDEGLT RACQTLLATR PTAVNLRWAI EAMAESLAAV PPDQRAQAAW
AKAGAICDED VALNEAIGDH GLGIIKDLAR TKGVEKGGEG PINILTHCNA GWLATVDWGT
ALAPLYKAHD AGLPIHVWVD ETRPRNQGAS LTAWELNSHG VPHTVIADNT GGHLMQHGLV
DMVIVGTDRT TATGDVCNKI GTYLKALAAF DNAVPFYVAL PGPTIDWTVN DGLREIPIEQ
RDAAEVTRVW GRTAAGALEW VTITPTGSPA ANYAFDVTPA RLITGLITER GVCAASAAGL
AGLYPERAPA PVPAGSAAGK GAAATADGAL