| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0315 |
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| Symbol | |
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| ID | 3833670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 383654 |
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| End bp | 385678 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637824397 |
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| Product | NADH dehydrogenase (quinone) |
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| Protein accession | YP_425407 |
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| Protein GI | 83591655 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.39787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAA CGCAAGTTTT CCTCGGCGCC TTCGCCGTCC TCGCCGCCCT TCCGGTCCTC
ACCCTGCTGG CCGGAAACCG CAAGTCCCTG GCGGGGTCGA TCACGCTGGT CGGCGTCGGT
GTCGCCTGCC TCGCCATGCT CGGGCTGGCC GTCACCGCTC TGACCGTAGG GCCGATCGCC
TTCGATCTGG GAACCGTGCC GCTGTTTGGC CTGACCTCGA GCCTCGCCTT CACCATCGAC
GGCCTGAGCG CGATCTTCGT CATCTTGATT TCCGTGCTCG GCACCGCCTC GGCCCTCTAT
TCGGTGGGCT ATATCGCCCA TTACCCCGAT GAGGACGCCC GGCGCTATTA CGTGCCTTTC
CCGCTGTTCA TCGCCGGCAT GCTGATGGTG GCGACGACCT CGGACTGGTT TTGTTTCTTC
TTCGGCTGGG AGTTCATGAC CCTGGTTTCC TATTTCCTGG TGACGTTCGA GAACCGGGAT
AAGGAGAACC TGTCGGCGGG CTTCATCTAT TTCTTCATGA CCCAGCTCAC CTCGATGGGG
CTGATGTTGG CTATCATCGT GCTGGGCACC TGGGGCGGGT CGACCTCCTT CGCCGCCGTC
GCCAAGACCC TGGGCGCCCT TCAGGCCGAG AATCCGGTCG CCCTTTACGG GCTGCTTAGC
CTGTTCTTCA TCGGCTTCGC CACCAAGGCC GGCATGTTCC CGCTGGGCAT CTGGCTGCCC
AAGGCCCATC CGGCCGCCCC GGCCAGCGTG TCGGCGCTGC TGTCGGGCGT GATGATCAAG
CTTGGCATCT ACGGCATGCT GCGCATCTTC CTGTGGGCCC TGCCGCTGGG CGAGGCCACC
CATGTCTGGG GCATGGTGAT CACCCTGTTT GGCGTGCTGT CGATGCTGGT CGGCACCCTG
CGCGCCCTGG GCGAACACGA TTGCAAGCGC CTGCTGGCCC AGCATTCCAT CGGCCAGATG
GGCTATGTGC TGCTTGGCCT CGGCCTGGGT CTGACCTTCC TTGGCAGCAA TCCGCTGTTC
GCCGCGCTTG GCTTTCTTGG CTGCCTCTAT CATCTGATCA ACCACGCCTG CTTCAAGTCG
CTGCTGTTTT TCAACACCGG CTCGATCCTC TACCGCGCCG GCACCCGCGA CCTTGATTCG
CTGGGTGGCC TGTCGGCGGT GATGCCGCTG ACCGCCGGCT GCGCCCTGGT CGGCGCCCTG
TCGATCGCCG GCACCCCGCC GTTCAACGGC TTCGTCAGCA AGTGGCTGCT TTATCAAAGC
GCTATCTTCG GCGACGTCAG CACCCCCGTT TACATCCTGG CCGCCGTCGT CGCCATTTTC
ATCGGCACCG TCACCCTGGC CTCCTTCGTC AAATACATGG GCACCGCCTA TCTTGGCACC
TTGCCCAAGC GCTTCGTCGG CAGCGGCTTT GGCTGCCCGC GGTCGATGGA GGCGGTCGAG
GTGTTCCTGG CCGTGGTCTG TCTGGTGATG GGCGTTTTCC CCGGCCCGGT GGTCGCCACC
TTGCTTGGCG TGCTGGATCC GGCCTTCGCC GGCGCCGGCG TCGATCTTGG CCCCAGCGTG
CTGAGCGCCC TGCCGTGGTC GGGGCTGTCG GTCACCTCGG CCTCGGGCAC GACCCTCACC
GTCTTCGCGC CGCTGGTGGT GATCGGTGGA CTGGCCGTCA GCTTCGCCCT GTCGGCGCTG
ATCCACGGCG CGGTCAAGGT GCCCTCGCGC CCGGCGCAGA TCTGGAACTG CGGCGAGGAG
ATCGACGACG AACTGGTGCG CTACCGCGCT TCAAGCTTCT ACAGCCCGTT TAAGAAGCTG
ATCGCCCCGG TCTATCGCCA GCACCCGTTC CCCACCCTGT CGCTGCCGGC GCTGCTGCCC
CGGCTCCTCG ATCTCGACAA GTGGCTCTAT TTCCCGATCG GCGCGCTTTT TCGCAAATCC
AGCAAGGCGA TCAGCCGGGC CCATACGGGT GTTCCCCAGC TCTACCTGTC CTGGCAGGTG
GCGGGTGGCG CCCTGGCCAT CGTCTTCGCC CTCTGGCTGA TGTGA
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| Protein sequence | MSTTQVFLGA FAVLAALPVL TLLAGNRKSL AGSITLVGVG VACLAMLGLA VTALTVGPIA
FDLGTVPLFG LTSSLAFTID GLSAIFVILI SVLGTASALY SVGYIAHYPD EDARRYYVPF
PLFIAGMLMV ATTSDWFCFF FGWEFMTLVS YFLVTFENRD KENLSAGFIY FFMTQLTSMG
LMLAIIVLGT WGGSTSFAAV AKTLGALQAE NPVALYGLLS LFFIGFATKA GMFPLGIWLP
KAHPAAPASV SALLSGVMIK LGIYGMLRIF LWALPLGEAT HVWGMVITLF GVLSMLVGTL
RALGEHDCKR LLAQHSIGQM GYVLLGLGLG LTFLGSNPLF AALGFLGCLY HLINHACFKS
LLFFNTGSIL YRAGTRDLDS LGGLSAVMPL TAGCALVGAL SIAGTPPFNG FVSKWLLYQS
AIFGDVSTPV YILAAVVAIF IGTVTLASFV KYMGTAYLGT LPKRFVGSGF GCPRSMEAVE
VFLAVVCLVM GVFPGPVVAT LLGVLDPAFA GAGVDLGPSV LSALPWSGLS VTSASGTTLT
VFAPLVVIGG LAVSFALSAL IHGAVKVPSR PAQIWNCGEE IDDELVRYRA SSFYSPFKKL
IAPVYRQHPF PTLSLPALLP RLLDLDKWLY FPIGALFRKS SKAISRAHTG VPQLYLSWQV
AGGALAIVFA LWLM
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