| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0247 |
|---|
| Symbol | |
|---|
| ID | 3833918 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodospirillum rubrum ATCC 11170 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007643 |
|---|
| Strand | - |
|---|
| Start bp | 307299 |
|---|
| End bp | 308303 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637824326 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_425339 |
|---|
| Protein GI | 83591587 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TTCTTCTTAC CGCCTGCGCC GCCGCCGCCC TGCTCTCGGC CTCGGCCGCG
ATGGCCGCCG ACGCCCCCAA GGCGCGCATC GCCGTGCTGA TGTATGGCAA TAAGGCCGAA
TTCGTCCAGT TGATGGAGCG CTATGGCAAG GAGCATCCCG CCGTGAAGGC CGGGATCGCC
GAGGTGACGT TCTATGACGG ACGCTATGAC GCCGCCGTCC AGAACGATCA GGCGCAGATG
GCGATCAACA CCAAGCAGGA CGCCATCGTC GTCAACCCGA TGGACTATGA AGCCAACATC
GATATCGCCA CCAACGCCAA GATGGCCGGG ATCCCGGTGG TGGTGACCAA CGCCCGCCTC
AACACCGACG AGATGACCGC CGAAGTGGTC TCCGACGACG TGCTCGGCGG CTATCTGGAA
GCCAAGGACG TGCTGACCAA GCTTGGCTGC AAGGGCAACG TCGTGATCAT CGAGGGGCCG
AAGGGCGGCT CGGGCGAGAT CCAGCGTGGT CAGGGCAACG AAAAGGCCCT GGCCGAATGC
CCGGCCGGCG CGGTGAAGGT GCTCGAGCGC AAGACCGCCA ATTGGTCGCG CGCCGAGGCC
CTTGATCTGA TGCAGAACTG GCTGAGCAAG CACCCGGGCA AGATCAACGG CGTCATCGGC
CAGAACGATG AAATGGCGCT CGGCGCCATC GAGGCGATCA AGGCCGCCGA CCTCAACGTC
AAGGATTTCG CCATCGCCGG CATCGACGGC GTGACCGATG CCCTGCACGC GGTCAAGGCC
GGCGAGATGA CCTCGATCCT TCAGGACGCC CGTGGCCAGA TCCAGGGCAG CATCGACGTC
GCCCTGCGCG CCGTGAAGGG CCCCGACTAC AAGCCGATGT CGCCGATCTG GGAACAGTAC
AAGGCCGACC TCGCCTGGGC CGATGGCCAG TCCAAGCGCT ATGACATCCC CTGGACCGTG
GTGACCACGG CCAATGTCGA CGAGCTGCTG AAAGACCGCA ATTAA
|
|---|
| Protein sequence | MKKLLLTACA AAALLSASAA MAADAPKARI AVLMYGNKAE FVQLMERYGK EHPAVKAGIA
EVTFYDGRYD AAVQNDQAQM AINTKQDAIV VNPMDYEANI DIATNAKMAG IPVVVTNARL
NTDEMTAEVV SDDVLGGYLE AKDVLTKLGC KGNVVIIEGP KGGSGEIQRG QGNEKALAEC
PAGAVKVLER KTANWSRAEA LDLMQNWLSK HPGKINGVIG QNDEMALGAI EAIKAADLNV
KDFAIAGIDG VTDALHAVKA GEMTSILQDA RGQIQGSIDV ALRAVKGPDY KPMSPIWEQY
KADLAWADGQ SKRYDIPWTV VTTANVDELL KDRN
|
|---|
| |