Gene Rru_A0193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0193 
Symbol 
ID3833884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp235912 
End bp237135 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content70% 
IMG OID637824271 
ProductBeta-ketoacyl synthase 
Protein accessionYP_425285 
Protein GI83591533 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAACCG TCGCCATCAC CGGCTTGGGA ATCGTCGCCG CGACCGGGGT GGGGGTGCCC 
TCCTTCTGGG CGGACGTCTG CGCCGGAGAG CCGCGGTTTT CCCCGTTGCC GCCTTTCGCG
CAAGGGACGC TGGGCTTCGG TCTCGGGGCG CAGGCCCTGG CCTTTGACCC CGAGCGGTTC
TTTGGCCGCC GGCAGCAGGG CCATCTTGAC CGCTTCGCCC AATTGGCCCT CGTTGCCGCA
CGCGAAGCCG TCGCCGACAG CGGCCTTGAC TGGAGCGAAG ACCTGCGGGC GCGCAGCGCC
GTTGTCACCG GATCGGCCAT CGGCGGGGAA CTGACGCAAG ACGAGGCGTT CTTGCGCATC
TATGGCCACG GCGGCCAGCA GGTGAACCCG GTGACGATCC CGCGGGTGAT GCCCTCGGCC
GGCGCTGTGG CGATTTCCAT GGAGTTCGGC CTCACCGGTC CGGTGCTGAC CCATTCCACC
GCCTGTTCCT CCGCCAGCCA CGCCATCGGC CAGGCGTTCA TGATGGTGCG GTCGGGCATG
GTCGATATCG CGATCGCCGG CGGCAGCGAG GCGCCCTTCG CCTTTGGCTA TCTGAAAGCC
TGGGAGGCGA TGCAGGTGGT TTCGCCGGAA GCCTGCCGCC CCTTTTCCCT GGGGCGCAAG
GGCATGAGCC TTGGCGAGGC GGGGGCGATG CTGGTTCTGG AACCTCTTGA GCGGGCACAG
GCGCGCGGCG CGCGGATTTA TGCCGAACTC GCCGGCTTCG GCATGTCGTC GGACGCCAGC
CATCTCACCC GCCCCCATGA GGCGGGTCCC GCCCGCGCCA TCCGCGCCGC CTTGGACGAT
GCCGGCTTGA GCCCTGGCGA GATCGGCCAC ATCAACGCCC ATGGCACCGG CACCGTGATG
AACGACACCG TGGAGGCCCG CGCCATCCGT GAGGTGTTTG GCGAGACGAT ACCGATGCTG
ACCTCGACCA AGGCCGTCCA CGGCCATACC CTGGGGGCAG CCGGCGCCGT GGAGGCGATC
GCCACCGTCC TTGCCGTCAG CGACGCCATG GTGCCGCCGA CGGCCGGGTT CACCGCCTTT
GATCCAGAGT GCGGCCTCGC CCCGGTCAGC GGGGCGGCGA GCCCCCCCCG CCATCGGGCG
GCGTTGAGCC ATTCCTTCGC CTTCGGCGGG CTTAACGCGG TCCTCGCCTT CCGCCCGACG
GACAGCGCCG AGAACCGGCG CTGA
 
Protein sequence
MRTVAITGLG IVAATGVGVP SFWADVCAGE PRFSPLPPFA QGTLGFGLGA QALAFDPERF 
FGRRQQGHLD RFAQLALVAA REAVADSGLD WSEDLRARSA VVTGSAIGGE LTQDEAFLRI
YGHGGQQVNP VTIPRVMPSA GAVAISMEFG LTGPVLTHST ACSSASHAIG QAFMMVRSGM
VDIAIAGGSE APFAFGYLKA WEAMQVVSPE ACRPFSLGRK GMSLGEAGAM LVLEPLERAQ
ARGARIYAEL AGFGMSSDAS HLTRPHEAGP ARAIRAALDD AGLSPGEIGH INAHGTGTVM
NDTVEARAIR EVFGETIPML TSTKAVHGHT LGAAGAVEAI ATVLAVSDAM VPPTAGFTAF
DPECGLAPVS GAASPPRHRA ALSHSFAFGG LNAVLAFRPT DSAENRR