| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0192 |
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| Symbol | |
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| ID | 3833883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | + |
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| Start bp | 233826 |
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| End bp | 235253 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637824270 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_425284 |
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| Protein GI | 83591532 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.684576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAA CCCCGACCGC AGGACCCGAT GCAGGCCGCC CGGCGTCCGT CCTGCCACCC
CTGCTGTTGC TTTCGGCTCC CATCATCATC TCCCAATGCG CGCAGATGGC CAGCGGTGTG
GTGGATGTGA TTATGGCCGG CAACCTCGAT GTGCTGACGT TGGGCACGGT CGCCACCGGA
GCCGCCCTCT GGGTGCCGAT GATGATCTTT CTTCTGGGCC TGCTCTACGG CGTAACCCCG
ACGATCGGCA AGATGCTGGG GGAGAATGCG TCGGAGGCCG TGTCCGGCGT GGCGGCGCGC
GGCTTGCTGG TCGGCCTCCT CGGGGGGGCG TTGCTGGGAG CGCTGCTGTT TTGGATGTCC
ACGCCGTTGT TCCGCCTTTT CGGGGTGGCG CCGGAGCTGA TTCCCGAGGC CTCCGCCTAC
CTGAACTGGA TGGCCTTGGC CATGCCCGGC ATGGGGCTTT TCCTGGCCTT TAGGTTCGTT
ATCGAAGCCC ATCACGTCGG TTGGATCGTG ACAGTGGTGG CCGTTTTGGG CGTGGCCGCC
AAAATCTGGC TGAACGACGC CCTGGTTCAT GGACATGCCG GCCTGCCGGC CCTTGGAACC
GGTGGGTTCG GCGCGGCCTC GGTGGCGCTG TATTGGGGGA TGGCGGTGAT GCTGGCGGGC
GCCACTTTTC TGCACGGGGC GGTCAAGCCC TTGTGGACTC ACCGTCTGTC GGGCGCCGAC
CTGTCGCTCG CCGCGATCGG CCGGTTTTTA CGGTTCGGCT TGCCCATCGC CCTGAACTTC
CTGTCCGACT ACCTGATCAT GGCGGTGGTG GCGGTGTTCA TCGCCACGCT GGGCGCGGTT
GCCATCGGCG CTCATCAGAT CACCTTCAAT ATATTGATGG TTTTGTTGAT GATGCCCACC
GGACTTAGCA TGGCGGCGAC GATTCTGATC TCGCGATCCC CGGGCGGCGG GCACACGGCC
ACCCTCGGCC CGGTGATGAG CTGGACGCTG GGGATTGGCG TTGCGTTTTC CATCGTCCTT
GCCGTCCTGC TGGCGGCGTT CGATGCGCCG GTGATCCGCC TTTATACCGA CGATGCGGAG
GTTATCGCCC TAGCCCTCGA CCTGCTGGGG GTCGTCGTGT TTATCCTCAC CATCGACGTG
GTGGCCATCG CCTTGGGATT TTTCCTGCGC GGGCTGGGTG ATCCGGGCAG CCCCTTCCTG
ATTTTGCTGG CGGCGCATTG GCTGATCAGC CTGCCTGTGG GGTACGTGCT GTGCTTCACG
GACTGGGTCG TGGCGCCGCA AGGTCCTCTC GGCTGGTGGT ACGGGCTGTC CACCGGTTTG
CTGGTCGCAT GCTGCCTCTT GGGGCTTCGT CTCCGGCAAA GGCTAAGTCG TGCCGCCCAG
CCGGTCTGTT CCCCGGCCGA GGCGACGGTG GCCGGGGTCG CGGAGTAG
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| Protein sequence | MTQTPTAGPD AGRPASVLPP LLLLSAPIII SQCAQMASGV VDVIMAGNLD VLTLGTVATG
AALWVPMMIF LLGLLYGVTP TIGKMLGENA SEAVSGVAAR GLLVGLLGGA LLGALLFWMS
TPLFRLFGVA PELIPEASAY LNWMALAMPG MGLFLAFRFV IEAHHVGWIV TVVAVLGVAA
KIWLNDALVH GHAGLPALGT GGFGAASVAL YWGMAVMLAG ATFLHGAVKP LWTHRLSGAD
LSLAAIGRFL RFGLPIALNF LSDYLIMAVV AVFIATLGAV AIGAHQITFN ILMVLLMMPT
GLSMAATILI SRSPGGGHTA TLGPVMSWTL GIGVAFSIVL AVLLAAFDAP VIRLYTDDAE
VIALALDLLG VVVFILTIDV VAIALGFFLR GLGDPGSPFL ILLAAHWLIS LPVGYVLCFT
DWVVAPQGPL GWWYGLSTGL LVACCLLGLR LRQRLSRAAQ PVCSPAEATV AGVAE
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