| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0183 |
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| Symbol | |
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| ID | 3833874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 217785 |
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| End bp | 220433 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637824261 |
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| Product | cold-shock DNA-binding protein family protein |
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| Protein accession | YP_425275 |
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| Protein GI | 83591523 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGGCG AATTCCTGAA TACCTATCAT TTCGTCCCGG TACGGGATGG CGGCCCAACC
CTCGGCCCAA CCCATGACTT GGAGAACGTG CGCGTGGCGC TGGCCAACGA CAGGGCGGGA
GCCAAGGAAT GGGATATCTG GAGCCATGAC CGCTGGCACG ACGGGCATCT GTCTGGACGC
ATCACCTGCA CCTTGACCAC CGAAGATCCG CTGGTCATCG GCGCCGAACA GAAAAGGGGG
GAGAATGGCG AGACCTGCAC GATCGTCGCG CCCTATCTGC TGGACGGCAA GCCGGCCATC
CCCCCCACCA CTCTCAAGGG GATGCTGTCG GCGCTGATCG AGGCCGCGAC GAATTCGGCG
ATGCGGGTGC TCGATGATCG GGCGCTGTCG GTGCGCCAGG ATATGAACAA GGCGTTATCG
GCTATCGGCA TGGTGATGCG CAAACCGGGG GTGGCACAAA CCGAGAGCGA AGGATGGGAT
TTGATCCCGC TGACTCTGCC GACGATAAAG CTAAAGCCGG GGGCAGGATA CCCGGAATCC
CCGCCGCCTT CTTTTCCAAT CCCGCACAGC TTTCTTACGC TTATGAAGAC GTTGCGCTGG
AAGCCGGCAC AGAAGGTTTT TGTCGGAACT CTGACGTGGC CAAAAGCTCC GCCGGGCACA
AATCGGCAAG AGCCCCCAAC TCCAGATGAA GATTTCAAAT TTATGATGAG GGCGGGAACC
TACTCGTCCG CAGCGCCCGC AACATATCTG ATGGACATAA CGCCGCTGCC CCTGACCCCG
GATGGCAAGG CCATCACCTA TAAGCCGTTG GTCACCCGCG TGAAACAGCT CCAAACCCCT
GGAAAACCCG AATTCTTGAT CGGGCAGAAA TCCAGGAATT CGAAGCTGTC GCGGCCGATT
CTCGAGAGCG ACGTCCCCGA GGAGCAGCGC CAGACCATGA CACGCGGTAT TCTGCGGGTC
ATGCACCATG ACGACCGCGT CAATGACTTA CCCCATACGC GCAAGCATGA AGTGTTTATC
CCTCTGCCTC AGGATCTCGA ATGCGCTCCT CGTCTGCCTA TCCCATCGGC CGTTGTCCGC
CTGTTCCATG CCCTGGCCGA CGAGCGCACA CAAACCCAAT CGGGCGGCAG AGACCAGAGT
GAATGGGGGG CCTTGCCCTT CCACCCAGTC GGAACCCGCC GTGCCGAGTC CCCCGCCCCG
TTTGGCAATG CCCTGCGGCT GAAAGAGGGA GACCTCGTGT TTTTCGATCT CAAGACGGGA
ACGGATAAAC AGCTTGAGGT GGCGGCGATC TCCTTTTCCT CAATCTGGCG CCAGTCCAAA
GAGAGCGTTT ACGACTACGT GCCGAAGGAT GCGCAGCCGC TGACTTCAAA CCGGTCCAGC
CTGTCGCCGA CCGAATTGAT GTTTGGCGTT GTCGAGGTGC GGCCCGAGGA TACGGCGGGA
ACGGATGGAT CGAATACCAT TGCCCTGAAA GGCCGCGTGC GCTGCGGCCC GGCGCGGTGT
GAGCGGGGGC AAGACGCCTT CATGACACCC GACCCCTCGG TGCGTCTTAA GATCCTGGCC
TCGCCAAAGC CACCCTCCCC GGCGCTCTAT TTCCGCCCGA AAGGAGTGAA AGACGGCTTC
ATTGCCAAGA CCGATTTAGC ATCGGCCAAT CACGAGATCC GCGGCCGTAA GATGTATCTT
CACCCCACCG CCCAGGCGCT GGGGGTGAAG GCTGTGGAAC AATCCAAGTC TCGAACCCCT
GAAAACGACC CATCCAACAA TCAGCGCAAC ATGGTCCGCC CCGTCAAACC GGGCGTGACC
TTCACCTTTT CCATAGACTT CGATGATCTG CCCACAGAGT GCCTGGACCT GCTGCTTTTC
GCCTGCCGTC CGACCAAGGA CTTCCGGCAC AGGCTGGGGA TGGGCAAGGC CCTTGGCCTG
GGCCGGGTCC GCGTGGACGT GACAGAGGTC AGCGTCATCG ACCGGGGGCG GCGCTATCGC
GTGGACGATC CGTTTACCAC CAAGCGCGCC CATCGGCTCT GGTCGGACGG GGTCGGTGAT
GCCGATTTGG ACCCGGCGCA GGCCGCGCGG CGGGTGGTGG ATAAGATGGA CGACGTTATC
CTGGCGCATC TGCTGGGCAT CGGCGAACCC CGCCACATCG GCGATCGCCC GGTCCATCCG
CCCTATACGG ACGACCAGCA AGCAGCCTTC CTGAAGCGCC TGTCGGGAGC GGAGGAAAAG
ACCTACGCGT GGTTCGTCGA GGTCTATACG CGCGGTCCCG CAAACCAGAA GTTCCTCCAG
GACATTCGCC TAACCCGCTC CCCCCCGGGA ACGGACGATC CCGTAGCGAC GATCGAGATG
CTGTCCCTTC CAACGACGGG GGCGACCTTG CCTCGAAAAG GGTCCAGGGC CGACCGACCG
CCGCCACCTT CCCCGAAACC CGCCGGACCC GCCAAACCCG CCGGACCCGA GATTAGGGGC
ACAGTGAAGC ACTATGACCC TATAAAGGGG CGCGGTTACA TCATTCCCGA TGGGAAAGGG
AGCGATATCC TCATCGAAAA AGCCGTTCTC AAAGCCTGCG GCATGGGACG TTTGAAGAAG
AACGACCGGG TTGTCGTCAT AACCAAGGAT CAGGGCGGAA AGCCGGTAGC GATAGACGTG
CGACGTTAG
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| Protein sequence | MPGEFLNTYH FVPVRDGGPT LGPTHDLENV RVALANDRAG AKEWDIWSHD RWHDGHLSGR
ITCTLTTEDP LVIGAEQKRG ENGETCTIVA PYLLDGKPAI PPTTLKGMLS ALIEAATNSA
MRVLDDRALS VRQDMNKALS AIGMVMRKPG VAQTESEGWD LIPLTLPTIK LKPGAGYPES
PPPSFPIPHS FLTLMKTLRW KPAQKVFVGT LTWPKAPPGT NRQEPPTPDE DFKFMMRAGT
YSSAAPATYL MDITPLPLTP DGKAITYKPL VTRVKQLQTP GKPEFLIGQK SRNSKLSRPI
LESDVPEEQR QTMTRGILRV MHHDDRVNDL PHTRKHEVFI PLPQDLECAP RLPIPSAVVR
LFHALADERT QTQSGGRDQS EWGALPFHPV GTRRAESPAP FGNALRLKEG DLVFFDLKTG
TDKQLEVAAI SFSSIWRQSK ESVYDYVPKD AQPLTSNRSS LSPTELMFGV VEVRPEDTAG
TDGSNTIALK GRVRCGPARC ERGQDAFMTP DPSVRLKILA SPKPPSPALY FRPKGVKDGF
IAKTDLASAN HEIRGRKMYL HPTAQALGVK AVEQSKSRTP ENDPSNNQRN MVRPVKPGVT
FTFSIDFDDL PTECLDLLLF ACRPTKDFRH RLGMGKALGL GRVRVDVTEV SVIDRGRRYR
VDDPFTTKRA HRLWSDGVGD ADLDPAQAAR RVVDKMDDVI LAHLLGIGEP RHIGDRPVHP
PYTDDQQAAF LKRLSGAEEK TYAWFVEVYT RGPANQKFLQ DIRLTRSPPG TDDPVATIEM
LSLPTTGATL PRKGSRADRP PPPSPKPAGP AKPAGPEIRG TVKHYDPIKG RGYIIPDGKG
SDILIEKAVL KACGMGRLKK NDRVVVITKD QGGKPVAIDV RR
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