| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rru_A0118 |
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| Symbol | |
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| ID | 3834179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodospirillum rubrum ATCC 11170 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007643 |
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| Strand | - |
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| Start bp | 138055 |
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| End bp | 139101 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637824189 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_425210 |
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| Protein GI | 83591458 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT |
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| TIGRFAM ID | [TIGR01420] pilus retraction protein PilT |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0334211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACCTGA CGTCTTTGCT GCGCCTTGCC CATCAGCGCT CCGCCAGCGA TCTCCATCTC
GCCGTGGGGA TGGCGCCGTC CCTGCGCATC GACGGCCGGT TAAGCGAGAT GACGCCGCAA
GGCGCCCTGA TTGATCGATC GGCGATCATG GGCCTGATCG CCCAGGCCCT TGACCAGCCG
GCGCGCGAGC GCCTGGAGCG CCTGGGCGAG GCCGAGGCGA TGCTGAGCTT GCCGATGGCC
GCCGATCCCC CCTTGCGGGT GCGGGTCACC GCCTGCCGGG CGCTGGCCGG GCCGACCCTG
GTGCTGCGCC TGCTCGCCGA TCGGCCACCG GCGGCCGAAA GCCTGGGACT GCCGCCGGCG
ATAACGGCGC TAACCGGGCG CCGCGACGGC TTGATCCTGA TCGCCGGCGC CGCCGGGGCG
GGCAAGACCA CCACGGCGGC CTGTTTGATC GACACCATCA ACCGGGCGGG CGGGCGCCAT
ATCCTGACCG TCGAGGATCC GGTGGAGTTC CGCCATGCGC CGCTGGGCGG ACCGGTCACC
CAGCGCGAGG TCGGCACCCA TACGGCAAGC TTCGCCGCCG GGCTGACGGC GGCCCTGCGC
GCCGACCCCG ATGTGGTGCT GATCGGCGAG ATCCGCGATC CCCAAACCCT GGCCCTGGCC
CTGCGTACCG CCGGGACCGG CCATCTGGTG ATCGCCACCT TGCATGCGGC GAGCGCGGCG
GGCGCCATTG ACCGCGCCCT TGATCTGCTG TCCTTCGATG GCGGCGCTCC CGGCCGGGAC
GCCGCCCGCG AGGCCCTGGC CACCGCCCTG GCCGCCGTGG TTTACCAGCG CCTGCTCGCC
CGTCGGGGCG GCGGGCGGAT CGGCCTTTTC AGCCTGCTGC TGGCCTCGCC GGCGGTGAAG
GCGGCGATCC GCGACGGCCA GACCCGCCAG TTGCCGGCGC TGATGGAGAT CGGCCGCCGC
CTGGGCATGC TGCCCGAAGC CGACGCCCGC GACGCCCTTG AAGCCGAAGG CCTTGTCGAA
GCGCGGTGCT TCGCCGATCA GCCGTGA
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| Protein sequence | MDLTSLLRLA HQRSASDLHL AVGMAPSLRI DGRLSEMTPQ GALIDRSAIM GLIAQALDQP
ARERLERLGE AEAMLSLPMA ADPPLRVRVT ACRALAGPTL VLRLLADRPP AAESLGLPPA
ITALTGRRDG LILIAGAAGA GKTTTAACLI DTINRAGGRH ILTVEDPVEF RHAPLGGPVT
QREVGTHTAS FAAGLTAALR ADPDVVLIGE IRDPQTLALA LRTAGTGHLV IATLHAASAA
GAIDRALDLL SFDGGAPGRD AAREALATAL AAVVYQRLLA RRGGGRIGLF SLLLASPAVK
AAIRDGQTRQ LPALMEIGRR LGMLPEADAR DALEAEGLVE ARCFADQP
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