Gene Rru_A0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRru_A0045 
Symbol 
ID3834375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodospirillum rubrum ATCC 11170 
KingdomBacteria 
Replicon accessionNC_007643 
Strand
Start bp46946 
End bp48160 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content65% 
IMG OID637824115 
Product3-oxoacyl-[acyl-carrier-protein] synthase II 
Protein accessionYP_425137 
Protein GI83591385 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGCG TCGTGGTTAC GGGCATGGGG GCGGTTTCGG CGATCGGAGC CAATGTTGGG 
GAATTCGCCG AGGCCCTGCG CCAGGGGCGG AGTGGGATCG GTCCGATCGA AGCCATCTCC
ACCGACCGGC TGACCGTCAA GATCGCCGCC GAAGTGAAGG GCTTCGATCC CAAGGCCCAT
TTCACCTCTG ACAAGCTGGC GATGCTCGAT CGCTTCGCCC AGCTCGCCCT GGTCGCCGCC
CGCGAGGCGA TGGCCGATAG CGCGTTGACC ATCGACGAGG ATCTGGCGCC GCGCTGCGCC
TGCATCATTG GCAGCGGTGG CAGCGGTCTG ATCACCCTCG AAGAGGGCTA CCGCCGCCTC
TATGAAGAGG GCAAGCACCG GGTGCCGCCC TTTACCGTGC CCAAATACAT GAACAATTCG
GCGACCAGTC AGGTGACTAT GGAATTCGGG CTGAAGGGCC CGGCTTTCTC GGTATCGAGC
GCCTGCGCCA CCGCCACCCA TTCCATCGGC CTCGGCTTTC ACATGGTGCG GTCGGGCATG
GCCGATGTCG CCGTGGTCGG CGGCGCCGAC GCCCTGATCA CCATGGGCCA TATCAAGGCC
TGGGAAGCCC TGCGCGTCGT CGCCAAGGAT ACCTGCCGGC CCTTCTGCAA GGATCGCAGC
GGCATGGTCC TGGCCGAAGG CGCGGCGGTT TTCGTGCTGG AAACCCTGGA AAGCGCCCAG
AAGCGCGGGG CGACCATCCA TGCCGAAATG GCTGGATTTG GCATGACCGC CGATGCCGGC
GATCTGCTCA GCCCCTCGGT CGACGGGGCG AGCCGCGCCG TTCGCATGGC TTTGGCCGAT
GGCGGCTTGG CCCCGGAAGA CATCGCCTAT GTGAACGCCC ATGGAACCGG AACGGTGGCC
AATGACGCGA CCGAAACCAA ATGCCTGCAC GAGGTTTTCG GCGACCATGC CCACAAGCTG
ATGATTTCGG CGACGAAATC GTTCCACGGT CATTCGCTGG GGGCGTCTGG CGCGGTGGAA
CTGGTGGCGA CGATTCTGGC GTTGCGCGAT GGCCTGATCG CTCCGACGCT GAATTTCACC
GAGCCCGATC CCGAATGCGA TCTGGACTAC GTGCCCAATG TGGCTCGTCA GGTCACGGTT
GACGCGGGGA TTTCCAACAG CTTCGCCTTC GGTGGCCTGA ACGCGGTGCT GGCCCTGCGG
CGGTTCGTCG GCTGA
 
Protein sequence
MRRVVVTGMG AVSAIGANVG EFAEALRQGR SGIGPIEAIS TDRLTVKIAA EVKGFDPKAH 
FTSDKLAMLD RFAQLALVAA REAMADSALT IDEDLAPRCA CIIGSGGSGL ITLEEGYRRL
YEEGKHRVPP FTVPKYMNNS ATSQVTMEFG LKGPAFSVSS ACATATHSIG LGFHMVRSGM
ADVAVVGGAD ALITMGHIKA WEALRVVAKD TCRPFCKDRS GMVLAEGAAV FVLETLESAQ
KRGATIHAEM AGFGMTADAG DLLSPSVDGA SRAVRMALAD GGLAPEDIAY VNAHGTGTVA
NDATETKCLH EVFGDHAHKL MISATKSFHG HSLGASGAVE LVATILALRD GLIAPTLNFT
EPDPECDLDY VPNVARQVTV DAGISNSFAF GGLNAVLALR RFVG