Gene Rpic_4988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4988 
Symbol 
ID6289901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010683 
Strand
Start bp40426 
End bp41214 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content59% 
IMG OID642627383 
Producthypothetical protein 
Protein accessionYP_001901349 
Protein GI187930863 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00700854 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCATG CACGCCTCTC CAGCCTTGTC GGGCTCATCG TTACATTACT GGGTCTATCG 
GCGCTTCCGG CGCATGCCGT CCTTCCAGAT GAGATTCAGG TCTACACCGG TGACATCAAC
GCACCTGGCG AGTTTGGTCT TGAGCTGCAC CTCAACACAA CGCCAAGCGG CATTTCGGAA
CCGTCCTATC CGCGCGAAGT CACAACGCCG CATGGTTGGC GGGCTACGGC CGAGTTTTCT
TACGGCCTGA CGTCGTCGGT AGAGCTTGGC CTGTACGTCC CGACCGCGCT CACACGCGAG
AACACCTACT ACGTCACGGG GCCAAAAGTG CGCGTGAAGT GGATGCCCGT TCGACCGGAA
GAAGGCGTCG GTTACTTCGC CGGTGTCAAC GTCGAGCTCG CTCACGTTGC AAATCGGTTT
GATCAATCGC AGCAAGCGGC CGAGTTGCGA CCAATCTACG GTTACCAGAA TGAACAGTGG
CTATGGGCGT TCAACCCAGT GCTCGACTGG AACCTCTCTG GCCCTGACCG CAGCGGGGTG
CCCGAAGTCG CACCTGCCTT CAAGGTCGCG CGGACATTGG CAACAGGTGT TCGCGCTGGA
TTGGAGTACT ACGCTGGGCT GGGGCGCGTC GACCATGTTT TGCCATTGCA AGAACAGCAG
CACACCGCCT TTCTTGCGTT TGACGTGGAT CGCAAGCCGT TCGTTTTCAA CTTTGGCGTG
GGCCGAGGTT TGACGCGCGC TACCGACCGA TGGACGTTTA AGTGGATTTT CGAAATCCCC
TTGAGCTGA
 
Protein sequence
MLHARLSSLV GLIVTLLGLS ALPAHAVLPD EIQVYTGDIN APGEFGLELH LNTTPSGISE 
PSYPREVTTP HGWRATAEFS YGLTSSVELG LYVPTALTRE NTYYVTGPKV RVKWMPVRPE
EGVGYFAGVN VELAHVANRF DQSQQAAELR PIYGYQNEQW LWAFNPVLDW NLSGPDRSGV
PEVAPAFKVA RTLATGVRAG LEYYAGLGRV DHVLPLQEQQ HTAFLAFDVD RKPFVFNFGV
GRGLTRATDR WTFKWIFEIP LS