Gene Rpic_4900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_4900 
Symbol 
ID6285131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010678 
Strand
Start bp1252171 
End bp1252527 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content65% 
IMG OID642619376 
ProductEndoribonuclease L-PSP 
Protein accessionYP_001893411 
Protein GI187927066 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.432991 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA TCCAACGCTT CCACACCAAC GCCCGCATGA GTCAGATCGT GATCGCCAAC 
GGCATCGTGC ACCTGGCCGG GCAAGTGCCC GAGATCGACT TCAAGTCGGT CACCGAGCAG
ACCAACAACA TCCTCGAGCG CATCGACGCC CTGCTGGCCG AAGCCGGTGT GGACAAGACG
CGATTGATTT CCGCCAACAT CTGGCTGACC GACGCCAAGC ACTTTGCGGA GCTGAACGCC
GCGTGGGAAG CCTGGGTGCC GGCCGGCCAC GCGCCCACGC GCGCCTGCGT GCAGTCGGGC
CTGATGCGCC CGGGCATCGA TGTGGAAATC GCCGTCACGG CGCTGGCCAA GGGTTAA
 
Protein sequence
MTDIQRFHTN ARMSQIVIAN GIVHLAGQVP EIDFKSVTEQ TNNILERIDA LLAEAGVDKT 
RLISANIWLT DAKHFAELNA AWEAWVPAGH APTRACVQSG LMRPGIDVEI AVTALAKG