| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_4895 |
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| Symbol | |
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| ID | 6285791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010678 |
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| Strand | + |
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| Start bp | 1243641 |
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| End bp | 1244501 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642619371 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001893406 |
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| Protein GI | 187927061 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.317832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA CGCCAGCACA GCAACCGCCC CAACACCAGG ACCGCCAGCC CGGCACCCAG
GAAGACATGA CGCCGCGCCC GCGCGCAGAC ATGGAGGACT ACGTGGGCAG CGGCAAACTC
AAGGACAAGG TCGCCATCGT CACCGGCGGC GACAGCGGTA TCGGCCGTGC GGTTGCCATC
GGCTTCGCCA AGGAAGGCGC CGACGTGCTG ATCGCCTACC TGGACGAACA CGACGACGCC
AACCAGACCT GCCGCCTTGT ACGCGCCACC GGCCGCCGCT GCGAAGCCAT TGCCGGCGAC
CTGGGCGACG AAGCGCATGC CCGCGCGGTG GTCACGCAGG CGGTGGCCAT GTTCGGCAAG
ATCGACATCG TCGTGAGCAA CGCCGCCGAG CAGCACCCGC AGCAAAGCCT GGCCGACATC
AATGCCGACC AGCTGGAGCG CACGTTCCGC ACCAACGTTT TCGCGATGTT CCATCTGCTG
CGTGCCGCGC TGCCCCATCT GCACGAAGGC GCACGCATCA TCACCACCAC GTCGGTCACC
GCATTTCGCG GCAGCGGCCA CCTGGTGGAT TACGCAGCCA CGAAGGGAGC GATCCTGGCC
TTCACGCGTT CGCTCGCCCA GCAACTGGCC GAAAAGAACA TCCTGGTGAA TGCCGTGGCG
CAAGGCCCGA TCTGGACGCC GTTGATTCCG TCGACCTTCG ATGCCGAGCA TGTCGTCCAA
TTCGGCAGCA AGGAGCCACT GGCCCGGGCT GGCCAGCCGG ATGAAGTGGC CCCTTGCTAC
ATCTTTCTCG CGTCTGCCGA TGCGAGTTAC ATGACGGGGC AGACGCTGCA TCCGAATGGG
GGGGAGATCG TCAATGGGTA A
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| Protein sequence | MPDTPAQQPP QHQDRQPGTQ EDMTPRPRAD MEDYVGSGKL KDKVAIVTGG DSGIGRAVAI
GFAKEGADVL IAYLDEHDDA NQTCRLVRAT GRRCEAIAGD LGDEAHARAV VTQAVAMFGK
IDIVVSNAAE QHPQQSLADI NADQLERTFR TNVFAMFHLL RAALPHLHEG ARIITTTSVT
AFRGSGHLVD YAATKGAILA FTRSLAQQLA EKNILVNAVA QGPIWTPLIP STFDAEHVVQ
FGSKEPLARA GQPDEVAPCY IFLASADASY MTGQTLHPNG GEIVNG
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